iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095687

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544962

Gene Name

PHYPADRAFT_129004

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S73_224V6	PP1S73_224V6.1	PP1S73_224V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.00e-29	99.9	284	313
E3 adaptor/Cullin RING/APC_C/CDC20	3.80e-134	447.5	149	455

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H+ +v++l++ ++   l+sG++D+ +++WD
   Q: 284  HEQEVCGLKWsPSgQQLASGGNDNILHIWD 313
           99*********66699************** PP

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 1    pekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladleekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtltgh 95
           pe+ ldap++ dd+ylnL+dWss+nvla+aLg++vylw+a+t+++++l  ++e+  +tsvsw ++g++lavG ++++v+++D ++ +++rtl gh
   Q: 149  PERTLDAPDMVDDYYLNLMDWSSSNVLAIALGMTVYLWDATTSSIEELVTVDEEGPITSVSWAPDGQYLAVGLNNSTVQLWDSTSLRQLRTLRGH 243
           6799******************************************************************************************* PP
   S: 96   sarvgaLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdassse.....Plkkfkehkaavkai 185
           sarvgaL+Wn  +l++G+rd++il +dvr++++ +  ++ah+qevCGlkw+ ++++LasGGnDn +++wdas  +     Pl++ +eh+aavka+
   Q: 244  SARVGALAWNGPTLATGGRDNAILNHDVRIRDHVIGSMEAHEQEVCGLKWSPSGQQLASGGNDNILHIWDASAASsasasPLHSLDEHQAAVKAL 338
           **********************************************************************9877667888*************** PP
   S: 186  awsPwqkslLasGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslalspdge 280
           aw+P+q++lLasGGGtaDrcikfwnt tga++++idt+sqvc l wsk++ke++s+hGf++n++ lwkyps+ k++el+gh++Rvl+la spdg 
   Q: 339  AWCPFQSNLLASGGGTADRCIKFWNTHTGACVNSIDTHSQVCALQWSKHEKEILSSHGFSQNQLCLWKYPSMVKMTELSGHTSRVLHLAQSPDGY 433
           *********************************************************************************************** PP
   S: 281  aivtaagDetlrfwklfdkkka 302
           ++++aagDetlrfw++f + ++
   Q: 434  TVASAAGDETLRFWNVFGTPET 455
           *****************87665 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MQSMAKSFQT PTKTNSVSCG KWDSVSLREN VSPVQLKKKT PKAKTPGRAT DRFITDRSAM 60
DFNVANLMLT KENSSMDVIS PSRDEYKKQL AESLLNNNGQ KQSRILAFKS KPPPPPEGLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGTCTA TGGCAAAGTC CTTCCAGACC CCGACGAAGA CGAACAGCGT GAGCTGTGGT 60
AAGTGGGACA GTGTATCTCT GAGGGAGAAT GTCAGCCCCG TGCAGCTTAA GAAGAAGACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR023302--Pept_S9A_N
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG

ppp:PHYPADRAFT_129004

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000974	Aegilops tauschii	65.55	1.00e-157	549.00
IUUC-Atr-003103	Amborella trichopoda	60.93	2.00e-147	514.00
IUUC-Aly-006253	Arabidopsis lyrata	63.68	7.00e-154	536.00
IUUC-Ath-006795	Arabidopsis thaliana	63.45	3.00e-153	534.00
IUUC-Bci-013607	Botrytis cinerea	47.26	4.00e-101	361.00
IUUC-Bdi-014344	Brachypodium distachyon	66.27	1.00e-158	551.00
IUUC-Bol-015368	Brassica oleracea	64.58	2.00e-155	543.00
IUUC-Bra-016738	Brassica rapa	66.59	2.00e-154	538.00
IUUC-Cme-027234	Cyanidioschyzon merolae	52.91	2.00e-113	401.00
IUUC-Dre-028026	Danio rerio	47.63	2.00e-106	379.00
IUUC-Dse-031391	Dothistroma septosporum	48.13	2.00e-98	352.00
IUUC-Gmo-039284	Gadus morhua	47.77	4.00e-109	387.00
IUUC-Gga-040790	Gallus gallus	50.12	2.00e-117	415.00
IUUC-Hvu-047565	Hordeum vulgare	64.94	1.00e-155	541.00
IUUC-Lma-052998	Leptosphaeria maculans	47.85	2.00e-98	352.00
IUUC-Mga-060102	Meleagris gallopavo	49.88	5.00e-117	414.00
IUUC-Oan-073677	Ornithorhynchus anatinus	50.40	2.00e-105	375.00
IUUC-Obr-076018	Oryza brachyantha	66.02	2.00e-156	544.00
IUUC-Ome-081186	Oryza meridionalis	65.63	8.00e-157	547.00
IUUC-Ola-086907	Oryzias latipes	48.39	3.00e-104	371.00
IUUC-Olu-087647	Ostreococcus lucimarinus	60.88	4.00e-156	543.00
IUUC-Psi-093188	Pelodiscus sinensis	49.38	3.00e-116	411.00
IUUC-Pno-094809	Phaeosphaeria nodorum	48.39	3.00e-99	355.00
IUUC-Pop-098890	Populus trichocarpa	66.67	1.00e-150	525.00
IUUC-Pca-101062	Procavia capensis	49.63	1.00e-113	402.00
IUUC-Pte-104142	Pyrenophora teres	48.12	8.00e-99	353.00
IUUC-Pyt-104693	Pyrenophora triticirepentis	48.12	9.00e-99	353.00
IUUC-Sja-107919	Schizosaccharomyces japonicus	47.40	1.00e-95	343.00
IUUC-Spo-108075	Schizosaccharomyces pombe	44.15	2.00e-94	338.00
IUUC-Ssl-108507	Sclerotinia sclerotiorum	47.26	4.00e-101	361.00
IUUC-Sit-110032	Setaria italica	66.50	1.00e-155	541.00
IUUC-Sly-111202	Solanum lycopersicum	67.56	2.00e-154	537.00
IUUC-Sbi-114207	Sorghum bicolor	66.98	4.00e-158	550.00
IUUC-Tsy-118931	Tarsius syrichta	39.68	4.00e-60	224.00
IUUC-Tca-120949	Theobroma cacao	67.95	2.00e-157	548.00
IUUC-Tae-123765	Triticum aestivum	65.55	6.00e-158	549.00
IUUC-Tur-126193	Triticum urartu	65.54	1.00e-156	545.00
IUUC-Vpa-130775	Vicugna pacos	40.07	1.00e-58	220.00
IUUC-Xtr-131993	Xenopus tropicalis	52.10	8.00e-120	423.00
IUUC-Zma-135135	Zea mays	67.07	2.00e-158	551.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence