iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044030

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000834

Gene Name

LOC100775550; GLYMA_01G173800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA01G37950	GLYMA01G37950.2	GLYMA01G37950.2
GLYMA01G37950	GLYMA01G37950.3	GLYMA01G37950.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.60e-26	93.1	272	342

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           e+++CpIs  lM dPv+++sG+ty+r  I+kw+++g+  cP+tr++l +  l+Pn ++++li++wc+ n++
   Q: 272  EYYKCPISSRLMYDPVIIESGVTYERIWIKKWFDEGNDICPKTRKKLVNMGLTPNMAMKDLISEWCKNNGV 342
           899****************************************************************9986 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MITDIGEGEE LQNPRSFKVH SKICTELAKL VDRISRIVPD IEAARPGFSS GIESLCLLNN 60
AIDKAKLLLL HCSECSKLYL AVTGDTVLSR CLKATRSLEK SLIQIQDMVP VMLAVEVSRI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGAAAAGGA AAATCCAAGA CTCAAAAACT CAAATAGAAG CTACTAATAA CAAGTATCCG 60
CGGAAACAAA AATCACGTTG GCGGGTCTCT CTCCTTCCTC CTAACTCAAA TAGATGCTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

gmx:100775550

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000166	Aegilops tauschii	34.46	2.00e-116	414.00
IUUC-Bdi-014593	Brachypodium distachyon	34.51	7.00e-116	411.00
IUUC-Bol-016241	Brassica oleracea	39.86	4.00e-126	445.00
IUUC-Bra-018043	Brassica rapa	38.91	4.00e-131	461.00
IUUC-Hvu-047756	Hordeum vulgare	33.64	3.00e-115	409.00
IUUC-Mtr-058085	Medicago truncatula	69.65	0.00e+00	1031.00
IUUC-Mac-064841	Musa acuminata	40.10	4.00e-135	475.00
IUUC-Olo-080310	Oryza longistaminata	34.47	8.00e-111	394.00
IUUC-Pop-098901	Populus trichocarpa	49.61	0.00e+00	679.00
IUUC-Ppe-101895	Prunus persica	47.46	1.00e-131	463.00
IUUC-Ptt-103761	Puccinia triticina	38.71	2.20e+00	29.30
IUUC-Sit-110432	Setaria italica	33.19	2.00e-103	370.00
IUUC-Sly-111406	Solanum lycopersicum	43.47	1.00e-139	489.00
IUUC-Stu-112174	Solanum tuberosum	43.38	7.00e-150	524.00
IUUC-Sbi-113885	Sorghum bicolor	34.08	5.00e-97	348.00
IUUC-Tca-121394	Theobroma cacao	49.93	0.00e+00	680.00
IUUC-Tae-123361	Triticum aestivum	34.81	3.00e-116	412.00
IUUC-Tur-126678	Triticum urartu	35.57	3.00e-108	386.00
IUUC-Vvi-130887	Vitis vinifera	48.67	0.00e+00	630.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence