iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gma-043280

Ensembl Protein ID

GLYMA19G34380.1

UniProt Accession

P13089; AUX28_SOYBN

Genbank Protein ID

AAA33945.1

Protein Name

Auxin-induced protein AUX28

Genbank Nucleotide ID

J03919

Gene Name

AUX28

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA19G34380	GLYMA19G34380.1	GLYMA19G34380.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	1.20e-15	59.1	134	231

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt.......................elknsevalkYeDedGDlvtlksDedldkavsllas 72
           +vkvs++g+++++++dl+ + ++++L + + + +                         l+ s++ ++YeD+dGD++ l++D++++++v+    
   Q: 134  FVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKmFSsftfgncesqgmkdfmnesklndLLNSSDYVPTYEDKDGDWM-LVGDVPWEMFVE---- 222
           79******************************6225669999*************9988888***************.************.... PP
   S: 73   kksllrlliqk 83
             s++rl+i+k
   Q: 223  --SCKRLRIMK 231
           ..********8 PP

Organism

Glycine max

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression (By similarity).

Protein Sequence
(Fasta)

MEVGLKKENM GFEETELRLG LPGNGGTEEV LIRKRGFSET ETGHEDESAT TVDLMLNLSS 60
KEAATTAAAA ADPTDKHKTL PKEKTLLPAD PAKPPAKTQV VGWPPVRSFR KNMLAVQKSV 120

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Nucleotide Sequence
(Fasta)

TTGTCCTGCC CCTGCCCCTA TACCATAGAA CATTAGTACC CCCACACACA CCCCTCCTCT 60
ATCTTTCACT ATTATTGCCA CACAAATCAA TTAACTGAAT GCTTAGAGAG AGAAAGAGGA 120

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Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

gmx:547965

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014859	Brachypodium distachyon	58.62	6.00e-70	256.00
IUUC-Ppe-101622	Prunus persica	71.98	2.00e-84	304.00
IUUC-Ssc-115247	Sus scrofa	31.82	3.00e-01	30.80

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence