iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043732

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000844

Gene Name

LOC100806115; GLYMA_11G122400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA11G13040	GLYMA11G13040.1	GLYMA11G13040.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.70e-08	36.5	137	179

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +f  +d +++lp C H+fh dC+ +w       + +++CPlCr
   Q: 137  CAVCLLEFedDDYVRTLPiCSHTFHVDCIDAW------LRSHANCPLCR 179
           ****99996533399*****************......**********8 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MAPSQPPHWA PSPSLTPTPI LHKSFFPPPS NSPAVDFSPP LIAMVVVVAA AFLVVTYSRL 60
IARHLRPPIH RLLRRFRRRR FLPSSVGDLE SLPYESPFDG PHVFSPYGLD ETVIKTIPFS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTCCTT CTCAGCCACC TCATTGGGCC CCATCTCCAT CTCTAACACC AACACCAATC 60
CTCCACAAGT CTTTCTTTCC CCCACCGTCA AACTCGCCGG CGGTTGACTT CAGTCCGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005738	Arabidopsis lyrata	53.14	9.00e-59	220.00
IUUC-Ath-006761	Arabidopsis thaliana	52.72	2.00e-58	219.00
IUUC-Bdi-014398	Brachypodium distachyon	42.48	1.00e-28	120.00
IUUC-Bol-015520	Brassica oleracea	48.89	1.00e-62	233.00
IUUC-Bra-017477	Brassica rapa	49.04	3.00e-61	229.00
IUUC-Lpe-051662	Leersia perrieri	42.53	1.00e-25	110.00
IUUC-Mtr-058344	Medicago truncatula	65.81	2.00e-101	362.00
IUUC-Mac-065095	Musa acuminata	60.00	2.00e-24	106.00
IUUC-Ogu-077985	Oryza glumaepatula	42.04	9.00e-24	104.00
IUUC-Oin-079093	Oryza indica	42.48	3.00e-22	99.80
IUUC-Oru-084986	Oryza rufipogon	39.64	1.00e-16	80.90
IUUC-Pop-099495	Populus trichocarpa	67.58	8.00e-90	323.00
IUUC-Sly-111253	Solanum lycopersicum	62.46	2.00e-81	296.00
IUUC-Stu-112012	Solanum tuberosum	63.35	1.00e-83	303.00
IUUC-Tae-123946	Triticum aestivum	45.62	3.00e-32	132.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence