iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095274

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544938

Gene Name

PHYPADRAFT_56938

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S7_342V6	PP1S7_342V6.1	PP1S7_342V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	6.20e-32	110.3	108	155

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           k+LLdltc+tVadmikgktpeeiRktFni+nDftpeEe++vR+EnqWA
   Q: 108  KNLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWA 155
           79*********************************************9 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MAEKRVKLKS SDDEMFEVDE AVAFESQAVK NMIEDTGIDA PIPLPNVSSK ILAKVIEYCK 60
YHVENQKPSD DKQATPEEEI KAWDADFVKV DQATLFDLIL AANYLNIKNL LDLTCQTVAD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATTGCTCGA GCTTTCTCCT TCCTCGGTCT TCCTTGTCTG GTGCTTCCTT CTCCGTCTTC 60
GGTTCAGTGA TATAGAGGTC GATCTCCCTC TTCACCGCCC CCACACTTTA AGCGTGCAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

ppp:PHYPADRAFT_56938

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000465	Aegilops tauschii	72.44	1.00e-54	204.00
IUUC-Atr-002858	Amborella trichopoda	82.58	2.00e-57	213.00
IUUC-Aly-006066	Arabidopsis lyrata	69.70	4.00e-55	206.00
IUUC-Ath-007281	Arabidopsis thaliana	72.50	2.00e-57	213.00
IUUC-Afl-008452	Aspergillus flavus	55.35	1.00e-39	154.00
IUUC-Ani-009312	Aspergillus nidulans	54.43	2.00e-38	150.00
IUUC-Aor-010012	Aspergillus oryzae	55.35	1.00e-39	154.00
IUUC-Bci-013888	Botrytis cinerea	51.67	3.00e-30	123.00
IUUC-Bdi-014448	Brachypodium distachyon	66.28	2.00e-47	181.00
IUUC-Bol-016431	Brassica oleracea	72.50	3.00e-56	209.00
IUUC-Cne-027058	Cryptococcus neoformans	56.10	1.00e-41	161.00
IUUC-Cme-027174	Cyanidioschyzon merolae	48.03	2.00e-37	147.00
IUUC-Dor-030847	Dipodomys ordii	55.97	1.00e-35	141.00
IUUC-Hvu-047497	Hordeum vulgare	69.75	1.00e-47	181.00
IUUC-Kpa-049138	Komagataella pastoris	43.48	3.00e-31	127.00
IUUC-Lpe-050940	Leersia perrieri	68.64	8.00e-46	175.00
IUUC-Mla-059153	Melampsora laricipopulina	56.05	4.00e-40	156.00
IUUC-Mvi-060342	Microbotryum violaceum	54.72	1.00e-41	161.00
IUUC-Mac-064509	Musa acuminata	76.92	5.00e-60	223.00
IUUC-Olu-087667	Ostreococcus lucimarinus	71.71	5.00e-55	205.00
IUUC-Pgr-103499	Puccinia graminis	54.14	2.00e-38	150.00
IUUC-Ptt-103874	Puccinia triticina	60.31	1.00e-35	142.00
IUUC-Pte-104224	Pyrenophora teres	45.58	1.00e-28	118.00
IUUC-Ssl-108591	Sclerotinia sclerotiorum	52.48	6.00e-37	145.00
IUUC-Smo-109307	Selaginella moellendorffii	87.66	3.00e-69	253.00
IUUC-Sre-115178	Sporisorium reilianum	57.79	2.00e-42	164.00
IUUC-Tca-121022	Theobroma cacao	80.52	5.00e-61	225.00
IUUC-Tae-123210	Triticum aestivum	73.08	2.00e-56	210.00
IUUC-Tur-126200	Triticum urartu	71.07	3.00e-55	206.00
IUUC-Uma-129517	Ustilago maydis	55.84	6.00e-40	155.00
IUUC-Vda-129691	Verticillium dahliae	50.00	4.00e-36	142.00
IUUC-Vvi-130994	Vitis vinifera	78.21	2.00e-61	227.00
IUUC-Zma-135470	Zea mays	67.65	5.00e-46	176.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence