iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cja-019541

Ensembl Protein ID

ENSCJAP00000004538.2

UniProt Accession

F7CJR4; F7CJR4_CALJA

Genbank Protein ID

ENSCJAP00000004538

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACFV01061175

Gene Name

NEDD1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000002430.2	ENSCJAT00000004784.2	ENSCJAP00000004538.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.80e-21	75.2	81	111
UBD/Beta-Prp	3.60e-42	145.5	78	300

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           tc+++ s+  +lvsG+ ++t+ +WDl++ +l
   Q: 81   TCVSLnSTsMYLVSGGLNNTVNIWDLKSKRL 111
           79999866699***************98776 PP

UBD/Beta-Prp

   S: 11   svitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsvl 98
           +  tcv     + +l++g+ ++t+ +wd++++ l rsl++h++evt+v+++ ++ ++++gs  + i +  +  + + +   +g ++sv+
   Q: 78   QKQTCVSLNSTSMYLVSGGLNNTVNIWDLKSKRLHRSLKDHKDEVTCVTYNWNDCYIASGSLSGEIILHRVTtNLSSTPFGHGSNQSVR 166
           4568888989999****************************************99********999999777244556666799***** PP
   S: 99   slsfsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvys 185
            l++s  +++ l s s+  ++ +wd+++++ +++++s h++  ++++++p +  l+v+ +lD+ + l+d +++k+++tl    + + + 
   Q: 167  HLKYSLfKKSLLGSVSDNGIVTLWDVNSQSPYHNFDSAHKAPASGICFSPVNeLLFVTIGLDKRIILYDTSSKKVVKTLVA--DTPLTA 253
           ******777888899*************************************999************************65..899*** PP
   S: 186  lsfdsngkelvsgsldgtvklwdlq.tgecvrtlnghtdnvksvrfs 231
           ++f ++g  l+ gs  g++  +dl+  ++ v+t  +h++ v++++f 
   Q: 254  VDFMPDGAALAIGSSRGKIYQYDLRmLKSPVKTISAHKTSVQCIAFQ 300
           *************************98889**************998 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MQENLRFASS GDDIKIWDAS SMTLVDKFNP HTSPHGISSI CWSSNNNFLV TASYSGDKIV 60
VSSCKCQPFP LLELAEGQKQ TCVSLNSTSM YLVSGGLNNT VNIWDLKSKR LHRSLKDHKD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCGCTGAGC GGGCCGCGGC CCCCTGTTGT GTTGCCGCCG TGAGGTGAGG TTTCGTAGGT 60
GCTGGGATCT GTGGGGCGCC GCCCGCCGCG TCCGTGCACC CTCGGGATCC CAGGGCCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0045177--C:apical part of cell
GO:0005814--C:centriole
GO:0036064--C:ciliary basal body
GO:0000242--C:pericentriolar material
GO:0000922--C:spindle pole

KEGG

cjc:100385249

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000871	Aegilops tauschii	37.50	5.00e-17	83.60
IUUC-Aml-002397	Ailuropoda melanoleuca	89.70	0.00e+00	1195.00
IUUC-Atr-002464	Amborella trichopoda	30.51	4.00e-39	156.00
IUUC-Apl-003870	Anas platyrhynchos	64.94	0.00e+00	854.00
IUUC-Aca-004925	Anolis carolinensis	60.12	0.00e+00	784.00
IUUC-Aly-005931	Arabidopsis lyrata	31.02	3.00e-39	156.00
IUUC-Ath-006681	Arabidopsis thaliana	28.73	8.00e-39	155.00
IUUC-Ame-010906	Astyanax mexicanus	45.42	5.00e-153	534.00
IUUC-Bta-013389	Bos taurus	89.24	0.00e+00	1188.00
IUUC-Bdi-014340	Brachypodium distachyon	31.90	8.00e-39	155.00
IUUC-Bol-015773	Brassica oleracea	29.92	9.00e-40	158.00
IUUC-Bra-016623	Brassica rapa	29.89	1.00e-39	159.00
IUUC-Cfa-021218	Canis familiaris	89.09	0.00e+00	1182.00
IUUC-Cpo-021697	Cavia porcellus	83.21	0.00e+00	1110.00
IUUC-Csa-023620	Chlorocebus sabaeus	95.15	0.00e+00	1288.00
IUUC-Cho-025105	Choloepus hoffmanni	85.11	0.00e+00	936.00
IUUC-Cin-025293	Ciona intestinalis	30.40	9.00e-70	258.00
IUUC-Csv-026234	Ciona savignyi	35.50	1.00e-49	189.00
IUUC-Dre-028251	Danio rerio	44.20	1.00e-140	493.00
IUUC-Dno-029281	Dasypus novemcinctus	87.09	0.00e+00	966.00
IUUC-Dor-031020	Dipodomys ordii	74.76	2.00e-173	602.00
IUUC-Ete-033113	Echinops telfairi	84.10	0.00e+00	671.00
IUUC-Eca-034230	Equus caballus	90.47	0.00e+00	1186.00
IUUC-Eeu-034671	Erinaceus europaeus	72.76	0.00e+00	773.00
IUUC-Fca-035775	Felis catus	90.30	0.00e+00	1212.00
IUUC-Fal-037557	Ficedula albicollis	62.63	0.00e+00	766.00
IUUC-Gmo-038586	Gadus morhua	59.41	7.00e-102	364.00
IUUC-Gga-040153	Gallus gallus	63.86	0.00e+00	847.00
IUUC-Gac-041385	Gasterosteus aculeatus	42.71	5.00e-135	474.00
IUUC-Gma-042844	Glycine max	31.03	2.00e-41	164.00
IUUC-Ggo-044576	Gorilla gorilla	95.61	0.00e+00	1311.00
IUUC-Hsa-046198	Homo sapiens	95.76	0.00e+00	1312.00
IUUC-Hvu-047794	Hordeum vulgare	37.50	2.00e-17	81.60
IUUC-Lch-050561	Latimeria chalumnae	50.08	1.00e-160	559.00
IUUC-Lpe-051469	Leersia perrieri	27.59	6.00e-37	149.00
IUUC-Loc-052816	Lepisosteus oculatus	49.65	1.00e-157	550.00
IUUC-Laf-053880	Loxodonta africana	87.75	0.00e+00	1125.00
IUUC-Mcc-054977	Macaca mulatta	94.85	0.00e+00	1285.00
IUUC-Meu-056141	Macropus eugenii	62.66	7.00e-177	613.00
IUUC-Mtr-058441	Medicago truncatula	30.97	1.00e-40	161.00
IUUC-Mga-060141	Meleagris gallopavo	61.86	0.00e+00	810.00
IUUC-Mmr-061201	Microcebus murinus	91.67	0.00e+00	1244.00
IUUC-Mdo-061855	Monodelphis domestica	73.17	0.00e+00	959.00
IUUC-Mmu-064342	Mus musculus	85.15	0.00e+00	1137.00
IUUC-Mac-065368	Musa acuminata	29.97	4.00e-39	156.00
IUUC-Mpu-066191	Mustela putorius furo	89.55	0.00e+00	1194.00
IUUC-Mlu-067310	Myotis lucifugus	86.97	0.00e+00	1143.00
IUUC-Nle-069990	Nomascus leucogenys	95.91	0.00e+00	1315.00
IUUC-Opr-070336	Ochotona princeps	81.52	0.00e+00	1049.00
IUUC-Ont-071675	Oreochromis niloticus	45.15	5.00e-144	504.00
IUUC-Oan-072772	Ornithorhynchus anatinus	70.63	0.00e+00	785.00
IUUC-Ocu-074095	Oryctolagus cuniculus	90.15	0.00e+00	1210.00
IUUC-Oba-075327	Oryza barthii	28.37	6.00e-38	152.00
IUUC-Obr-076119	Oryza brachyantha	28.65	1.00e-38	155.00
IUUC-Ogl-077820	Oryza glaberrima	28.09	2.00e-37	150.00
IUUC-Ogu-078679	Oryza glumaepatula	28.57	7.00e-38	152.00
IUUC-Oin-079891	Oryza indica	28.37	4.00e-38	153.00
IUUC-Olo-080414	Oryza longistaminata	31.11	8.00e-37	148.00
IUUC-Ome-081888	Oryza meridionalis	28.65	3.00e-38	153.00
IUUC-Oni-082417	Oryza nivara	28.37	5.00e-38	152.00
IUUC-Opu-083393	Oryza punctata	28.37	4.00e-38	153.00
IUUC-Oru-084698	Oryza rufipogon	28.37	3.00e-38	154.00
IUUC-Osa-086121	Oryza sativa	28.37	5.00e-38	152.00
IUUC-Ola-086806	Oryzias latipes	40.50	4.00e-141	495.00
IUUC-Olu-087591	Ostreococcus lucimarinus	22.88	3.00e-14	72.80
IUUC-Oga-088622	Otolemur garnettii	90.03	0.00e+00	1212.00
IUUC-Oar-090391	Ovis aries	86.48	0.00e+00	1022.00
IUUC-Ptr-091036	Pan troglodytes	95.61	0.00e+00	1311.00
IUUC-Pan-092576	Papio anubis	95.15	0.00e+00	1290.00
IUUC-Psi-093450	Pelodiscus sinensis	68.51	0.00e+00	883.00
IUUC-Pma-094101	Petromyzon marinus	55.31	2.00e-104	372.00
IUUC-Ppa-095636	Physcomitrella patens	31.49	2.00e-40	160.00
IUUC-Pfo-097142	Poecilia formosa	59.33	2.00e-108	386.00
IUUC-Pab-097829	Pongo abelii	95.61	0.00e+00	1308.00
IUUC-Pop-098972	Populus trichocarpa	32.28	6.00e-39	155.00
IUUC-Pca-100217	Procavia capensis	83.61	0.00e+00	701.00
IUUC-Ppe-101502	Prunus persica	30.79	5.00e-40	159.00
IUUC-Pva-102736	Pteropus vampyrus	87.73	0.00e+00	1166.00
IUUC-Rno-104977	Rattus norvegicus	85.45	0.00e+00	1094.00
IUUC-Sha-107003	Sarcophilus harrisii	73.47	0.00e+00	964.00
IUUC-Smo-109328	Selaginella moellendorffii	30.33	1.00e-41	164.00
IUUC-Sit-109796	Setaria italica	29.76	2.00e-38	154.00
IUUC-Sly-110941	Solanum lycopersicum	29.25	3.00e-36	147.00
IUUC-Stu-112314	Solanum tuberosum	27.73	8.00e-37	149.00
IUUC-Sar-112926	Sorex araneus	81.52	0.00e+00	1092.00
IUUC-Sbi-113822	Sorghum bicolor	28.80	6.00e-27	115.00
IUUC-Ssc-116242	Sus scrofa	90.88	0.00e+00	658.00
IUUC-Tgu-116765	Taeniopygia guttata	63.95	0.00e+00	793.00
IUUC-Tru-117738	Takifugu rubripes	43.27	7.00e-153	534.00
IUUC-Tsy-118856	Tarsius syrichta	85.20	0.00e+00	1082.00
IUUC-Tni-120871	Tetraodon nigroviridis	43.93	2.00e-151	529.00
IUUC-Tca-120965	Theobroma cacao	29.75	8.00e-38	152.00
IUUC-Tae-123588	Triticum aestivum	28.49	2.00e-39	157.00
IUUC-Tur-126840	Triticum urartu	28.11	2.00e-39	157.00
IUUC-Ttr-128551	Tursiops truncatus	87.88	0.00e+00	1161.00
IUUC-Vpa-130324	Vicugna pacos	89.85	0.00e+00	1176.00
IUUC-Vvi-131699	Vitis vinifera	31.43	3.00e-39	156.00
IUUC-Xtr-131956	Xenopus tropicalis	60.67	0.00e+00	810.00
IUUC-Xma-132982	Xiphophorus maculatus	58.33	6.00e-108	384.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence