iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-105402

Ensembl Protein ID

ENSRNOP00000032833.4

UniProt Accession

D3ZJ51; D3ZJ51_RAT

Genbank Protein ID

ENSRNOP00000032833

Protein Name

Similar to KIAA1111-like protein

Genbank Nucleotide ID

AC115277

Gene Name

RGD1310212

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000026582.5	ENSRNOT00000036473.5	ENSRNOP00000032833.4

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
DNA & RNA Element
RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	8.00e-09	35.9	6	54

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C +C+++++ ++ ++eC+ C++wfH  C++++ ee+  + + + Cp+C+
   Q: 6    VYC-LCRQPYNVNHFMIECDLCQDWFHGSCVGIE-EEKAVDIDIYHCPDCE 54
           69*.******************************.999999989******6 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MALVPVYCLC RQPYNVNHFM IECDLCQDWF HGSCVGIEEE KAVDIDIYHC PDCEVIYGPS 60
IMKKWPASSK EHEALKREPV KTGSPIFIHQ LQGKTFDSSD EVILKPTGSQ LTVEFLEESS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGTATTTA TATGAAACAT CAGAAAGTTA CCACCGACTT CAGGGCCAAA GAAAGTGGCC 60
TGGGAATGGC TCAAAGGTAG AGCAGGACAT AGAATTATTT CTCTGTTTTC TCTCAGTGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003347--JmjC_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51184--JMJC
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF02373--JmjC
PF00628--PHD

SMART

SM00558--JmjC
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002986	Amborella trichopoda	48.00	1.00e-11	63.20
IUUC-Ath-007631	Arabidopsis thaliana	44.00	1.00e-10	59.70
IUUC-Bdi-014153	Brachypodium distachyon	46.00	1.00e-11	62.80
IUUC-Bol-015887	Brassica oleracea	46.00	5.00e-12	64.30
IUUC-Bra-017570	Brassica rapa	44.00	3.00e-11	62.00
IUUC-Gma-043039	Glycine max	44.00	3.00e-11	61.60
IUUC-Lpe-051400	Leersia perrieri	43.94	3.00e-12	64.70
IUUC-Mtr-057710	Medicago truncatula	44.00	1.00e-10	59.70
IUUC-Mmu-063134	Mus musculus	79.38	0.00e+00	1369.00
IUUC-Mac-065355	Musa acuminata	43.28	8.00e-12	63.50
IUUC-Oba-075188	Oryza barthii	48.00	2.00e-11	62.00
IUUC-Obr-076844	Oryza brachyantha	48.00	6.00e-12	63.90
IUUC-Ogl-077260	Oryza glaberrima	48.00	5.00e-12	64.30
IUUC-Ogu-078663	Oryza glumaepatula	48.00	3.00e-12	65.10
IUUC-Oin-079894	Oryza indica	48.00	3.00e-12	65.10
IUUC-Olo-080411	Oryza longistaminata	48.00	2.00e-12	65.50
IUUC-Ome-081623	Oryza meridionalis	48.00	3.00e-12	65.10
IUUC-Oni-082587	Oryza nivara	48.00	3.00e-12	65.10
IUUC-Opu-083591	Oryza punctata	48.00	4.00e-12	64.70
IUUC-Oru-084597	Oryza rufipogon	48.00	3.00e-12	65.10
IUUC-Osa-086057	Oryza sativa	48.00	3.00e-12	65.10
IUUC-Olu-087802	Ostreococcus lucimarinus	50.00	2.00e-15	75.10
IUUC-Ppe-101758	Prunus persica	46.00	6.00e-11	60.50
IUUC-Sit-110474	Setaria italica	52.00	4.00e-13	68.20
IUUC-Sly-111450	Solanum lycopersicum	44.00	9.00e-11	60.10
IUUC-Stu-112650	Solanum tuberosum	46.00	1.00e-10	60.10
IUUC-Sbi-114098	Sorghum bicolor	52.00	5.00e-13	67.40
IUUC-Tca-121518	Theobroma cacao	48.00	1.00e-11	62.80
IUUC-Tae-122704	Triticum aestivum	46.00	3.00e-12	65.10
IUUC-Tur-126461	Triticum urartu	46.00	2.00e-12	65.10
IUUC-Vvi-131614	Vitis vinifera	48.00	4.00e-12	64.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence