iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017460

Ensembl Protein ID

Bra013211.1-P

UniProt Accession

M4D9Q1; M4D9Q1_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra013211	Bra013211.1	Bra013211.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.80e-09	36.6	94	136

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+ f++g  +  l CgH+fh++C++kw       + +++CPlCr
   Q: 94   CSVCLTKFEEGseVNKLKCGHLFHKTCVEKW-----IDYWNITCPLCR 136
           ********8874466677*************.....6999*******8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MGLSSLPGPS EGMLCIILVN AALSISMFKG IVRSVLHLVG IRLSPSSVAS SEIPTSETFD 60
FRICQPESFL EEFRNRTPTL KFESLCKKQE DNECSVCLTK FEEGSEVNKL KCGHLFHKTC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTCTAT CGAGTCTTCC TGGTCCATCA GAAGGAATGC TATGCATTAT ATTAGTCAAC 60
GCAGCATTAT CAATCTCCAT GTTCAAAGGC ATTGTCAGAT CAGTGCTTCA CCTAGTAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002705	Amborella trichopoda	48.95	2.00e-36	144.00
IUUC-Aly-005890	Arabidopsis lyrata	81.37	4.00e-64	236.00
IUUC-Ath-006955	Arabidopsis thaliana	74.07	9.00e-60	221.00
IUUC-Bdi-014597	Brachypodium distachyon	37.32	2.00e-19	87.80
IUUC-Bol-015727	Brassica oleracea	78.75	5.00e-67	245.00
IUUC-Gma-043655	Glycine max	62.67	2.00e-50	190.00
IUUC-Hvu-047116	Hordeum vulgare	36.50	6.00e-18	82.40
IUUC-Lpe-051313	Leersia perrieri	34.29	1.00e-22	98.60
IUUC-Mtr-058124	Medicago truncatula	59.33	1.00e-48	184.00
IUUC-Mla-059140	Melampsora laricipopulina	34.18	9.00e-07	47.80
IUUC-Mac-064673	Musa acuminata	45.32	3.00e-23	100.00
IUUC-Ogl-077775	Oryza glaberrima	32.88	9.00e-20	89.40
IUUC-Oin-079546	Oryza indica	32.88	9.00e-20	89.40
IUUC-Oni-082196	Oryza nivara	32.88	9.00e-20	89.40
IUUC-Oru-084312	Oryza rufipogon	32.88	8.00e-20	89.40
IUUC-Osa-086234	Oryza sativa	32.88	9.00e-20	89.40
IUUC-Pop-099448	Populus trichocarpa	62.16	1.00e-51	194.00
IUUC-Ppe-101936	Prunus persica	58.60	1.00e-44	171.00
IUUC-Sit-110820	Setaria italica	28.48	3.00e-12	64.30
IUUC-Sly-111064	Solanum lycopersicum	44.83	4.00e-29	119.00
IUUC-Stu-112754	Solanum tuberosum	50.34	2.00e-39	154.00
IUUC-Tca-121106	Theobroma cacao	59.59	3.00e-47	179.00
IUUC-Vvi-131394	Vitis vinifera	56.85	1.00e-45	175.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence