iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017841

Ensembl Protein ID

Bra015754.1-P

UniProt Accession

M4DGX8; M4DGX8_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra015754	Bra015754.1	Bra015754.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.10e-25	88.1	23	99

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceens 73
           ++e+f+Cp+++++M+dPv+l++G+t++r++Ie w++++ +      cP+t+++l+ +dl P+++lr++i++w+++n+
   Q: 23   IYEAFICPLTKKVMQDPVTLENGQTFEREAIENWFKECTEngkpvLCPITSKQLSITDLSPSIALRDTIEEWRARND 99
           799********************************7776667799*****************************997 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MAASCDGSQS DQSSTFEPGI DNIYEAFICP LTKKVMQDPV TLENGQTFER EAIENWFKEC 60
TENGKPVLCP ITSKQLSITD LSPSIALRDT IEEWRARNDC MKLDIARQSL YLGNAEANIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGCAA GTTGTGATGG AAGTCAGTCA GACCAAAGCT CTACGTTCGA GCCAGGGATC 60
GACAACATAT ACGAAGCATT CATCTGTCCG TTAACAAAGA AAGTCATGCA AGATCCAGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005886--C:plasma membrane
GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005480	Arabidopsis lyrata	86.07	0.00e+00	1329.00
IUUC-Ath-007569	Arabidopsis thaliana	85.70	0.00e+00	1332.00
IUUC-Bdi-014487	Brachypodium distachyon	54.59	0.00e+00	821.00
IUUC-Ppa-096021	Physcomitrella patens	45.01	0.00e+00	650.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence