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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-136665
Ensembl Protein ID ENSRNOP00000022986.5
UniProt Accession D3Z916; D3Z916_RAT
Genbank Protein ID AABR07028664
Protein Name Family with sequence similarity 188, member A;Similar to RIKEN cDNA 2310047O13 (Predicted)
Genbank Nucleotide ID EDL78709.1
Gene Name Fam188a;RGD1309605_predicted;rCG_55819
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000016955.5 ENSRNOT00000022986.5 ENSRNOP00000022986.5
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
UBD/Alpha-Helix/MIU 95.06 0.00e+00 847.00 IUUC-Hsa-136747
DUB/MINDY 95.06 0.00e+00 847.00 IUUC-Hsa-136747
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MSEVTKELLE LVWGTKSSPG LSDTIFCRWT QGFVFSDSEG SALEQFEGGP CAVIAPVQAF 60
LLKKLLFSSE KSSWRDCSED EQKELLCHTL CDILESACDS SGSYCMVSWL RGRTTEDAAR 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-136665|DUB,MINDY;UBD,MIU|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TCCTAGTTGC GGCTTCGCCC GGCTTGACAG GCGCTGTCTC TGCGGGCACC GAGCTACACT 60
CATCCCGCTC GGCCTCCCAA TCGCGCCTCG GCCGCCGCCG TCCCGCTGCC CTTTTCTCAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-136665|DUB,MINDY;UBD,MIU|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
Interpro

IPR025257--DUF4205
IPR011992--EF-hand-dom_pair
Pfam

PF13898--DUF4205
SMART

SM01174--DUF4205
Gene Ontology

GO:0031965--C:nuclear membrane
GO:0005654--C:nucleoplasm
GO:0016807--F:cysteine-type carboxypeptidase activity
GO:1990380--F:Lys48-specific deubiquitinase activity
KEGG rno:291320
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-136377 Aegilops tauschii 30.35 3.00e-45 176.00
IUUC-Aml-136379 Ailuropoda melanoleuca 94.17 0.00e+00 837.00
IUUC-Atr-136383 Amborella trichopoda 30.89 7.00e-41 161.00
IUUC-Apl-136385 Anas platyrhynchos 84.43 0.00e+00 643.00
IUUC-Aca-136389 Anolis carolinensis 82.06 0.00e+00 759.00
IUUC-Aly-136394 Arabidopsis lyrata 29.79 5.00e-47 182.00
IUUC-Ath-136396 Arabidopsis thaliana 31.00 1.00e-47 184.00
IUUC-Ame-136407 Astyanax mexicanus 73.17 0.00e+00 697.00
IUUC-Bta-136411 Bos taurus 93.71 0.00e+00 841.00
IUUC-Bdi-136416 Brachypodium distachyon 30.21 9.00e-47 181.00
IUUC-Bol-136419 Brassica oleracea 30.13 1.00e-45 177.00
IUUC-Bra-136421 Brassica rapa 31.12 5.00e-46 179.00
IUUC-Cja-136424 Callithrix jacchus 94.38 0.00e+00 841.00
IUUC-Cfa-136428 Canis familiaris 91.06 0.00e+00 753.00
IUUC-Cpo-136432 Cavia porcellus 94.16 0.00e+00 838.00
IUUC-Csa-136438 Chlorocebus sabaeus 95.06 0.00e+00 847.00
IUUC-Cho-136444 Choloepus hoffmanni 89.61 6.00e-163 566.00
IUUC-Cin-136447 Ciona intestinalis 41.98 1.00e-94 340.00
IUUC-Csv-136448 Ciona savignyi 41.53 1.00e-93 336.00
IUUC-Dre-136452 Danio rerio 73.09 0.00e+00 654.00
IUUC-Dno-136456 Dasypus novemcinctus 92.81 0.00e+00 829.00
IUUC-Dor-136461 Dipodomys ordii 90.11 0.00e+00 649.00
IUUC-Dme-136466 Drosophila melanogaster 43.19 9.00e-110 390.00
IUUC-Ete-136467 Echinops telfairi 72.07 0.00e+00 639.00
IUUC-Eca-136471 Equus caballus 94.61 0.00e+00 845.00
IUUC-Eeu-136476 Erinaceus europaeus 87.19 0.00e+00 742.00
IUUC-Fca-136477 Felis catus 93.50 0.00e+00 834.00
IUUC-Fal-136481 Ficedula albicollis 84.38 0.00e+00 753.00
IUUC-Gmo-136486 Gadus morhua 68.16 5.00e-178 617.00
IUUC-Gga-136491 Gallus gallus 84.53 0.00e+00 784.00
IUUC-Gac-136495 Gasterosteus aculeatus 68.39 0.00e+00 628.00
IUUC-Gma-136499 Glycine max 29.29 7.00e-44 172.00
IUUC-Ggo-136502 Gorilla gorilla 87.02 0.00e+00 754.00
IUUC-Hsa-136747 Homo sapiens 95.06 0.00e+00 847.00
IUUC-Hvu-136508 Hordeum vulgare 34.80 6.00e-39 154.00
IUUC-Itr-136510 Ictidomys tridecemlineatus 93.40 4.00e-106 376.00
IUUC-Lch-136515 Latimeria chalumnae 76.39 0.00e+00 702.00
IUUC-Lpe-136518 Leersia perrieri 28.71 4.00e-41 162.00
IUUC-Loc-136521 Lepisosteus oculatus 75.95 0.00e+00 708.00
IUUC-Laf-136527 Loxodonta africana 93.03 0.00e+00 828.00
IUUC-Mcc-136530 Macaca mulatta 95.06 0.00e+00 847.00
IUUC-Meu-136534 Macropus eugenii 58.42 4.00e-89 322.00
IUUC-Mga-136543 Meleagris gallopavo 84.01 0.00e+00 728.00
IUUC-Mmr-136547 Microcebus murinus 94.61 0.00e+00 846.00
IUUC-Mdo-136551 Monodelphis domestica 87.87 0.00e+00 827.00
IUUC-Mmu-136555 Mus musculus 97.52 0.00e+00 867.00
IUUC-Mpu-136561 Mustela putorius furo 92.69 2.00e-180 624.00
IUUC-Mlu-136565 Myotis lucifugus 93.26 0.00e+00 833.00
IUUC-Nle-136572 Nomascus leucogenys 95.06 0.00e+00 847.00
IUUC-Opr-136576 Ochotona princeps 65.40 2.00e-133 468.00
IUUC-Ont-136579 Oreochromis niloticus 67.34 1.00e-179 622.00
IUUC-Oan-136582 Ornithorhynchus anatinus 85.39 0.00e+00 741.00
IUUC-Ocu-136585 Oryctolagus cuniculus 94.61 0.00e+00 842.00
IUUC-Oba-136589 Oryza barthii 28.54 5.00e-48 185.00
IUUC-Obr-136592 Oryza brachyantha 28.02 3.00e-47 182.00
IUUC-Ogl-136593 Oryza glaberrima 28.54 6.00e-48 185.00
IUUC-Ogu-136595 Oryza glumaepatula 28.54 8.00e-48 185.00
IUUC-Oin-136597 Oryza indica 28.39 9.00e-46 177.00
IUUC-Olo-136599 Oryza longistaminata 27.61 6.00e-48 185.00
IUUC-Oni-136602 Oryza nivara 28.54 6.00e-48 185.00
IUUC-Opu-136604 Oryza punctata 28.60 1.00e-47 184.00
IUUC-Oru-136606 Oryza rufipogon 28.54 6.00e-48 185.00
IUUC-Osa-136608 Oryza sativa 30.87 8.00e-33 134.00
IUUC-Ola-136610 Oryzias latipes 68.61 0.00e+00 647.00
IUUC-Oga-136614 Otolemur garnettii 93.96 0.00e+00 836.00
IUUC-Oar-136619 Ovis aries 93.48 0.00e+00 838.00
IUUC-Ptr-136623 Pan troglodytes 94.83 0.00e+00 845.00
IUUC-Pan-136627 Papio anubis 95.06 0.00e+00 847.00
IUUC-Psi-136631 Pelodiscus sinensis 85.39 2.00e-180 624.00
IUUC-Pma-136635 Petromyzon marinus 70.42 3.00e-47 181.00
IUUC-Pfo-136641 Poecilia formosa 65.79 0.00e+00 633.00
IUUC-Pab-136645 Pongo abelii 94.83 0.00e+00 844.00
IUUC-Pop-136650 Populus trichocarpa 31.26 1.00e-39 157.00
IUUC-Pca-136652 Procavia capensis 72.36 0.00e+00 629.00
IUUC-Ppe-136656 Prunus persica 28.78 2.00e-45 176.00
IUUC-Pva-136658 Pteropus vampyrus 85.17 0.00e+00 726.00
IUUC-Sha-136671 Sarcophilus harrisii 88.31 0.00e+00 830.00
IUUC-Smo-136678 Selaginella moellendorffii 31.16 2.00e-44 173.00
IUUC-Sit-136680 Setaria italica 28.82 4.00e-36 145.00
IUUC-Sly-136683 Solanum lycopersicum 29.56 8.00e-44 171.00
IUUC-Sar-136685 Sorex araneus 84.68 0.00e+00 631.00
IUUC-Sbi-136688 Sorghum bicolor 31.26 8.00e-46 178.00
IUUC-Ssc-136691 Sus scrofa 94.38 0.00e+00 844.00
IUUC-Tgu-136694 Taeniopygia guttata 86.47 0.00e+00 745.00
IUUC-Tru-136698 Takifugu rubripes 67.32 0.00e+00 642.00
IUUC-Tsy-136703 Tarsius syrichta 89.89 0.00e+00 775.00
IUUC-Tni-136706 Tetraodon nigroviridis 70.02 0.00e+00 656.00
IUUC-Tca-136711 Theobroma cacao 29.36 3.00e-44 173.00
IUUC-Tae-136714 Triticum aestivum 30.14 1.00e-47 184.00
IUUC-Tur-136716 Triticum urartu 26.24 3.00e-29 123.00
IUUC-Tbe-136719 Tupaia belangeri 93.22 0.00e+00 765.00
IUUC-Ttr-136722 Tursiops truncatus 90.34 0.00e+00 803.00
IUUC-Vda-136727 Verticillium dahliae 24.36 5.00e-02 32.00
IUUC-Vpa-136729 Vicugna pacos 93.46 0.00e+00 773.00
IUUC-Vvi-136732 Vitis vinifera 28.84 1.00e-45 177.00
IUUC-Xtr-136734 Xenopus tropicalis 70.43 1.00e-177 615.00
IUUC-Xma-136738 Xiphophorus maculatus 67.79 0.00e+00 640.00
Created Date 25-Jun-2017

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