iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112583

Ensembl Protein ID

PGSC0003DMT400060272

UniProt Accession

M1C5I2; M1C5I2_SOLTU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400023445	PGSC0003DMT400060272	PGSC0003DMT400060272

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.80e-30	106.0	8	77

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawcee 71
           +p  f+CpIsl+l++dPv+l++G+tydrssIekwl+ g++tcPvt+q+l+++++vPn+tlr+li++w++ 
   Q: 8    IPILFRCPISLDLFKDPVTLCTGQTYDRSSIEKWLSCGNSTCPVTMQKLHDSTIVPNTTLRHLIDRWLQI 77
           7889***************************************************************985 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MKQPEIGIPI LFRCPISLDL FKDPVTLCTG QTYDRSSIEK WLSCGNSTCP VTMQKLHDST 60
IVPNTTLRHL IDRWLQINCS HGYDLDYFQT VDDSFVVLKH NLQSMESTLE AKVEALEKVI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCTTTCTTT GCTTTATTTT ACTTAGATAA GGCCTACTCT TTTTTTGGCC AACTCTTGTG 60
TTTTGTATCT CTTTGTTCTC TTATCATTTT TCCCACTCAC TTTTGGCCTA TTACTCCTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sot:107060302

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002561	Amborella trichopoda	38.34	1.00e-54	206.00
IUUC-Bdi-014442	Brachypodium distachyon	39.91	1.00e-36	146.00
IUUC-Gma-043080	Glycine max	52.39	2.00e-91	328.00
IUUC-Hvu-047498	Hordeum vulgare	54.17	1.00e-16	79.30
IUUC-Lpe-051453	Leersia perrieri	36.80	6.00e-34	136.00
IUUC-Mtr-058668	Medicago truncatula	51.11	3.00e-90	324.00
IUUC-Mac-065385	Musa acuminata	42.12	9.00e-69	252.00
IUUC-Oba-075982	Oryza barthii	70.67	1.00e-29	121.00
IUUC-Ogl-077204	Oryza glaberrima	72.22	1.00e-28	119.00
IUUC-Ogu-078726	Oryza glumaepatula	45.13	2.00e-29	122.00
IUUC-Oin-079338	Oryza indica	44.62	2.00e-30	125.00
IUUC-Ome-081303	Oryza meridionalis	40.89	8.00e-35	140.00
IUUC-Oni-082692	Oryza nivara	70.67	2.00e-29	122.00
IUUC-Opu-083613	Oryza punctata	31.55	1.00e-38	152.00
IUUC-Oru-084341	Oryza rufipogon	69.33	8.00e-29	120.00
IUUC-Osa-086241	Oryza sativa	34.63	3.00e-31	128.00
IUUC-Pop-099942	Populus trichocarpa	51.98	5.00e-89	320.00
IUUC-Ppe-101486	Prunus persica	50.61	8.00e-90	322.00
IUUC-Sit-110225	Setaria italica	69.86	9.00e-30	123.00
IUUC-Sly-111154	Solanum lycopersicum	92.82	0.00e+00	749.00
IUUC-Sbi-114119	Sorghum bicolor	34.57	6.00e-39	153.00
IUUC-Tca-121526	Theobroma cacao	49.48	2.00e-72	264.00
IUUC-Tae-122999	Triticum aestivum	39.92	5.00e-41	160.00
IUUC-Tur-126273	Triticum urartu	62.12	9.00e-18	83.20
IUUC-Vvi-131284	Vitis vinifera	49.63	3.00e-91	327.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence