iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099117

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Brassinosteroid-responsive ring-H2 family protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_644490; POPTR_0002s16340g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s16340	POPTR_0002s16340.1	POPTR_0002s16340.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.10e-08	35.7	93	136

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  +d+ + l  C+H+fh++Cl +w     +   + +CPlCr
   Q: 93   CAVCLYEFegEDEIRWLKnCKHIFHRTCLDRW-----MDHDRKTCPLCR 136
           ********99666887767*************.....688899*****8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGFPVGYSEV FLPKLFVHIL SFLGFIRNLI LCLFNYLGLS GFLETDNIWP DNPIRMSCYP 60
PLSAALLREI LPVIKFEDLV TGDGGCCDLP ESCAVCLYEF EGEDEIRWLK NCKHIFHRTC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTCTCAGAA AAGAAACAAT CTTTTTTCTT TGTTATCCCC CCCCCCCTCT CTCTCCTTTT 60
CCCGCTGATG GGGTTTCCAG TTGGGTATTC AGAGGTTTTC TTACCAAAGT TGTTTGTACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0002s16340g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000163	Aegilops tauschii	51.43	1.00e-17	81.60
IUUC-Aly-006447	Arabidopsis lyrata	70.24	2.00e-63	234.00
IUUC-Ath-006985	Arabidopsis thaliana	70.24	2.00e-63	234.00
IUUC-Bdi-014279	Brachypodium distachyon	47.12	8.00e-24	102.00
IUUC-Bol-016059	Brassica oleracea	70.41	5.00e-65	239.00
IUUC-Bra-016739	Brassica rapa	70.41	3.00e-64	236.00
IUUC-Lma-052952	Leptosphaeria maculans	47.27	4.00e-13	69.30
IUUC-Ppe-102039	Prunus persica	67.88	9.00e-62	228.00
IUUC-Tca-121864	Theobroma cacao	73.49	5.00e-63	232.00
IUUC-Tur-126801	Triticum urartu	47.69	8.00e-16	75.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence