iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014035

UUCD1 version

UUC-BrD-01244

Ensembl Protein ID

BRADI5G20082.1

UniProt Accession

I1J180; I1J180_BRADI

Protein Name

Uncharacterized protein

Gene Name

LOC100828758

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI5G20082	BRADI5G20082.1	BRADI5G20082.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.50e-38	127.3	307	341
UBD/Beta-Prp	8.10e-85	285.1	151	379

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgv 34
           H d+vtcla+  s+++++sG+ Dgt+++WD  +g 
   Q: 307  HDDGVTCLAWigSSRYVASGCIDGTVHIWDSLSGE 341
           99*********866****************76665 PP

UBD/Beta-Prp

   S: 23   sllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlk...ghedsvlslsfspsgdklvsGsh 114
           +l+++gs+d  i  w+++   ++ ++sgh+++vt+ +f pdgk++ +gs+D+t+++wd+++  c h+++    h++ +++l++  +++++vsGs+
   Q: 151  NLIIAGSEDFNIWMWNADLNAFVNTFSGHSNTVTCGDFTPDGKLICSGSDDATLRIWDFNSAHCRHVVRghgYHTQGLTCLAVTWDSQSIVSGSQ 245
           689******************************************************************4433689999999999********** PP
   S: 115  drtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdl 209
           d+ +++  +++g+++   l gh+ +v c+ ++p  n +++Gs Dr + +Wdl t + +r   + h+d v++l++  ++++++sg  dgtv +wd 
   Q: 246  DSSVHIVSINSGKVVG-SLVGHTNSVECIGISPRYNWVATGSIDRRLIIWDL-TRQAIRSICE-HDDGVTCLAWIGSSRYVASGCIDGTVHIWDS 337
           ***************9.****************99*****************.9999999998.******************************* PP
   S: 210  qtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdl 251
            +ge  r l gh+d v+s+++s +++ +vs+ssD+s r++d+
   Q: 338  LSGELARMLSGHRDAVQSLAVSADGNSIVSVSSDKSARVFDI 379
           ****************************************97 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MIRAAPAAAV MSIAGDVPGE GSEGEEVFID DDDIINEIPL DEEDLPDQDD DDEQDQDMMD 60
EVEDHSAYAF HGHTDEVFAA ACSPVDASLV VSGGHKDTVS TVAFSSDGKL VACGSMDGRI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATCCGTG CGGCACCAGC GGCGGCGGTC ATGAGTATTG CAGGCGATGT CCCCGGAGAA 60
GGCTCCGAAG GGGAGGAGGT CTTCATCGAC GACGATGACA TCATCAATGA GATACCCCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030687--C:preribosome, large subunit precursor
GO:0051082--F:unfolded protein binding
GO:0042273--P:ribosomal large subunit biogenesis

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence