iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099672

Ensembl Protein ID

POPTR_0014s11620.1

UniProt Accession

B9I9J2; B9I9J2_POPTR

Genbank Protein ID

EEE98616.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000350

Gene Name

POPTRDRAFT_664353; POPTR_0014s11620g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s11620	POPTR_0014s11620.1	POPTR_0014s11620.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.10e-28	97.0	323	359
UBD/Beta-Prp	5.60e-46	158.2	236	500

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf....sd.tllvsGsdDgtikvWDlrt 32
           gHt+ vt++af     +  +l+s+sdDgt++vWD r 
   Q: 323  GHTGAVTAIAFsprlGSvYHLLSSSDDGTCRVWDARY 359
           8***********99844589**************765 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghe 94
           +l+gh+++v +   f +++++++tgs+d+ +k+w+++t  +l+s  ghe+ +t++  s++  + +++s+D +i+vw l +g ++++l+gh+
   Q: 236  KLRGHRTAVYC-AIFDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLQGHT 325
           67888887766.999**************************************************************************** PP
   S: 95   dsvlslsfsp...sgdklvsGshdrtirvwdletgqclee........................tlsghdgvvncvvvhpdgnllvsGslD 158
             v++++fsp   s ++l+s s+d t rvwd +   c+                           + +++  + c +++ +g  +v+Gs D
   Q: 326  GAVTAIAFSPrlgSVYHLLSSSDDGTCRVWDARYSHCSPRiyvpkpsdaltgkssgtfsngpssSNGPQSNQILCCAYNANGTAFVTGSSD 416
           **********98777***********************************************99888999999****************** PP
   S: 159  rtvrlWdl......ktgkllrtl..tgghtdsvyslsfdsng..........................kelvsgsldgtvklwd 208
           +  r+W+       ++++ ++++   +gh+++v+ ++f+                               +v++s+dg+ ++w 
   Q: 417  TYARVWNAcksntdESEQPIHEMdvLSGHENDVNYVQFSGCAvaprssmsdtlkedsvpkfktswfchDKIVTCSRDGSAIIWR 500
           **********************999555*********776666777778888899999999**********************6 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDIWNRSSSG GASSIGKPLL DFSNTVMEKA HFEQQGRVRV NEKKIDVDHR EIYFLIMHFL 60
SSGPFHRTFR QFQDEVLGHE LLPRRYHAWF SRSGAHNGND NNDGVSLPLS YDKLVERYPH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTTTCTGTA GACTCTGTTG GTATGTTTTC AATTGTTATG TCTATGTTTA TGAAAGATAA 60
ATGAACAAGT GCTTCCTTGT TTCTCAGGTT TTACCTAAAA TATGGATATC TGGAATCGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001487--Bromodomain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00439--Bromodomain
PF00400--WD40

SMART

SM00297--BROMO
SM00320--WD40

KEGG

pop:POPTR_0014s11620g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001881	Ailuropoda melanoleuca	30.59	2.00e-72	267.00
IUUC-Aly-006517	Arabidopsis lyrata	74.10	0.00e+00	1177.00
IUUC-Ath-006577	Arabidopsis thaliana	67.86	0.00e+00	1164.00
IUUC-Bta-013217	Bos taurus	30.92	2.00e-74	275.00
IUUC-Bdi-014797	Brachypodium distachyon	61.06	0.00e+00	808.00
IUUC-Bol-016525	Brassica oleracea	55.61	0.00e+00	1482.00
IUUC-Cfa-021037	Canis familiaris	31.21	1.00e-75	279.00
IUUC-Cpo-021934	Cavia porcellus	30.78	8.00e-75	276.00
IUUC-Cre-023003	Chlamydomonas reinhardtii	34.10	1.00e-33	138.00
IUUC-Csv-025813	Ciona savignyi	27.14	6.00e-58	218.00
IUUC-Dno-030048	Dasypus novemcinctus	31.73	3.00e-73	270.00
IUUC-Dor-030195	Dipodomys ordii	36.23	5.00e-33	137.00
IUUC-Ete-032717	Echinops telfairi	34.08	6.00e-36	147.00
IUUC-Eca-034349	Equus caballus	31.47	3.00e-70	261.00
IUUC-Fca-036099	Felis catus	30.59	2.00e-72	268.00
IUUC-Fal-037307	Ficedula albicollis	31.07	3.00e-77	284.00
IUUC-Gga-040865	Gallus gallus	31.20	8.00e-76	279.00
IUUC-Ggo-045500	Gorilla gorilla	31.03	3.00e-75	277.00
IUUC-Hsa-046350	Homo sapiens	31.03	3.00e-75	277.00
IUUC-Hvu-047706	Hordeum vulgare	74.72	1.00e-143	501.00
IUUC-Laf-053848	Loxodonta africana	31.03	1.00e-74	275.00
IUUC-Mcc-054638	Macaca mulatta	30.89	5.00e-75	276.00
IUUC-Mtr-057637	Medicago truncatula	64.41	0.00e+00	1155.00
IUUC-Mga-060165	Meleagris gallopavo	31.27	6.00e-75	276.00
IUUC-Mmr-061227	Microcebus murinus	31.18	5.00e-76	280.00
IUUC-Mdo-062074	Monodelphis domestica	30.88	2.00e-75	278.00
IUUC-Mpu-066628	Mustela putorius furo	31.03	8.00e-75	275.00
IUUC-Mlu-068082	Myotis lucifugus	30.45	3.00e-72	267.00
IUUC-Nle-069402	Nomascus leucogenys	31.07	1.00e-74	275.00
IUUC-Oan-072954	Ornithorhynchus anatinus	30.97	4.00e-79	290.00
IUUC-Ocu-074456	Oryctolagus cuniculus	31.43	2.00e-71	265.00
IUUC-Olu-087745	Ostreococcus lucimarinus	33.09	5.00e-75	276.00
IUUC-Oar-090042	Ovis aries	30.74	1.00e-72	268.00
IUUC-Ptr-091213	Pan troglodytes	31.03	3.00e-75	278.00
IUUC-Pan-092444	Papio anubis	31.03	2.00e-75	278.00
IUUC-Psi-093271	Pelodiscus sinensis	32.35	1.00e-70	262.00
IUUC-Pma-094427	Petromyzon marinus	33.64	3.00e-37	148.00
IUUC-Pca-101128	Procavia capensis	32.38	4.00e-67	250.00
IUUC-Ppe-101283	Prunus persica	59.72	0.00e+00	1629.00
IUUC-Pva-102512	Pteropus vampyrus	30.45	3.00e-72	267.00
IUUC-Rno-105687	Rattus norvegicus	31.47	9.00e-75	276.00
IUUC-Sha-106680	Sarcophilus harrisii	30.75	3.00e-75	277.00
IUUC-Sly-111348	Solanum lycopersicum	70.44	0.00e+00	1079.00
IUUC-Tgu-116513	Taeniopygia guttata	30.92	4.00e-77	284.00
IUUC-Tca-121615	Theobroma cacao	70.97	0.00e+00	1291.00
IUUC-Tbe-127479	Tupaia belangeri	35.77	2.00e-32	135.00
IUUC-Ttr-128561	Tursiops truncatus	30.78	6.00e-72	266.00
IUUC-Vpa-130160	Vicugna pacos	31.88	2.00e-70	261.00
IUUC-Vvi-131332	Vitis vinifera	70.99	0.00e+00	1360.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence