iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.6__2896__AT4G08590.1	fgenesh2_kg.6__2896__AT4G08590.1	fgenesh2_kg.6__2896__AT4G08590.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.60e-07	32.0	104	153
E3 activity/RING/RING	2.80e-06	28.4	110	149

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplt 51
           ++e+++C++ ++l+  Pv++++G+ +  ++ ekw+++g++tc ++r+p+ 
   Q: 104  ICEDLNCSLCNQLPDRPVTTQCGHNFCLKCFEKWIDRGNETCAKCRSPIP 153
           7899******************************************9986 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C + +++ p++++CgH f+++C++kw       +++ +C  Cr
   Q: 110  CSLCNQLPDR-PVTTQCGHNFCLKCFEKW-----IDRGNETCAKCR 149
           ****999999.******************.....566777777775 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MARDNQLPGD GDGVSTPEES LTYRTCDTPS HVTCVSSPPL DRSGDVDPLP VSGIGGHESG 60
GSKADESMID TDETKKRKRL LSGEEKSDGE IASVDDGVDV FAAICEDLNC SLCNQLPDRP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCGAAATGGC GCGTGACAAC CAGCTTCCAG GCGACGGCGA CGGTGTATCC ACGCCGGAGG 60
AATCCCTCAC TTACCGCACG TGCGATACCC CTTCGCACGT GACCTGCGTT TCATCTCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR015947--PUA-like_domain
IPR003105--SRA_YDG
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51015--YDG
PS50089--ZF_RING_2

Pfam

PF02182--SAD_SRA

SMART

SM00184--RING
SM00466--SRA

Gene Ontology

GO:0005737--C:cytoplasm
GO:0016021--C:integral component of membrane
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_489762

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007664	Arabidopsis thaliana	82.24	0.00e+00	784.00
IUUC-Acl-008349	Aspergillus clavatus	31.68	5.00e-07	48.50
IUUC-Afu-008782	Aspergillus fumigatus	33.80	7.00e-06	44.70
IUUC-Bci-013703	Botrytis cinerea	33.09	8.00e-10	57.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence