iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ocu-074910

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02064289

Gene Name

UBE4B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000016997.3	ENSOCUT00000017009.2	ENSOCUP00000014614.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.50e-22	79.5	1228	1299

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
            p+ef++p++ +lM+dPv lpsG  +drs I ++l ++ + +P++rqplte++l P  +l++ iqaw+ e+++
   Q: 1228 APDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPT-DPFNRQPLTESMLEPVPELKEQIQAWMREKQN 1299
           79**********************************9998.***************************99986 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MEELSADEIR RRRLARLAGG QTSQPTTPLT SPQRESPPGP PLAASAPGPS QSLGLNVHNM 60
TPATSPIGAA GVAHRSQSSE GVSSLSSSPS NSLETQSQSL SRSQSMDIDG VACEKSMSQV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGAGC TGAGCGCTGA TGAGGTGAGC GGGCGTGGGG ACACCTTGAA TTCCTTGGCA 60
GCTCTGCTGC TGCCGACCGG GGTGGGCTTG CGCCGGGGGT GCCCGGCTGT TGGGCTCGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019474--Ub_conjug_fac_E4_core
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box
PF10408--Ufd2P_core

SMART

SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0000151--C:ubiquitin ligase complex
GO:0005524--F:ATP binding
GO:0034450--F:ubiquitin-ubiquitin ligase activity
GO:0008626--P:granzyme-mediated apoptotic signaling pathway
GO:0031175--P:neuron projection development
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051865--P:protein autoubiquitination
GO:0006513--P:protein monoubiquitination
GO:0000209--P:protein polyubiquitination
GO:0034976--P:response to endoplasmic reticulum stress
GO:0009411--P:response to UV
GO:0003222--P:ventricular trabecula myocardium morphogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000585	Aegilops tauschii	33.07	1.00e-94	341.00
IUUC-Aml-002396	Ailuropoda melanoleuca	98.10	0.00e+00	1724.00
IUUC-Atr-002479	Amborella trichopoda	32.14	9.00e-100	358.00
IUUC-Apl-003747	Anas platyrhynchos	93.27	0.00e+00	1669.00
IUUC-Aca-004866	Anolis carolinensis	93.26	0.00e+00	1651.00
IUUC-Aly-006300	Arabidopsis lyrata	30.76	1.00e-88	321.00
IUUC-Ath-006962	Arabidopsis thaliana	30.50	3.00e-85	310.00
IUUC-Ago-007880	Ashbya gossypii	29.82	6.00e-77	282.00
IUUC-Acl-008289	Aspergillus clavatus	30.52	1.00e-99	358.00
IUUC-Afl-008711	Aspergillus flavus	30.57	4.00e-104	372.00
IUUC-Afu-008766	Aspergillus fumigatus	30.98	7.00e-104	372.00
IUUC-Ani-009126	Aspergillus nidulans	30.89	2.00e-102	367.00
IUUC-Ang-009837	Aspergillus niger	30.56	4.00e-99	356.00
IUUC-Aor-009919	Aspergillus oryzae	30.17	8.00e-100	358.00
IUUC-Ate-010300	Aspergillus terreus	31.74	2.00e-107	384.00
IUUC-Ame-011355	Astyanax mexicanus	84.32	0.00e+00	1570.00
IUUC-Bgr-011995	Blumeria graminis	30.44	2.00e-100	360.00
IUUC-Bta-013056	Bos taurus	98.10	0.00e+00	1725.00
IUUC-Bci-013605	Botrytis cinerea	28.83	1.00e-89	325.00
IUUC-Bdi-015032	Brachypodium distachyon	30.22	3.00e-90	327.00
IUUC-Bol-016124	Brassica oleracea	30.75	7.00e-95	342.00
IUUC-Bra-017426	Brassica rapa	30.48	2.00e-95	344.00
IUUC-Cel-018606	Caenorhabditis elegans	31.35	2.00e-101	363.00
IUUC-Cja-018872	Callithrix jacchus	95.09	0.00e+00	2234.00
IUUC-Cfa-020045	Canis familiaris	97.99	0.00e+00	1724.00
IUUC-Cpo-022309	Cavia porcellus	97.65	0.00e+00	1718.00
IUUC-Cre-022726	Chlamydomonas reinhardtii	29.42	1.00e-50	193.00
IUUC-Csa-024003	Chlorocebus sabaeus	96.52	0.00e+00	1092.00
IUUC-Cho-025092	Choloepus hoffmanni	87.52	0.00e+00	1022.00
IUUC-Cin-025533	Ciona intestinalis	47.51	0.00e+00	832.00
IUUC-Csv-026081	Ciona savignyi	63.98	2.00e-60	224.00
IUUC-Cgl-026710	Colletotrichum gloeosporioides	31.21	1.00e-104	374.00
IUUC-Cne-027098	Cryptococcus neoformans	30.82	1.00e-104	375.00
IUUC-Cme-027352	Cyanidioschyzon merolae	32.38	4.00e-87	316.00
IUUC-Dre-027979	Danio rerio	83.91	0.00e+00	1511.00
IUUC-Dno-029282	Dasypus novemcinctus	97.87	0.00e+00	1720.00
IUUC-Dor-030904	Dipodomys ordii	78.17	0.00e+00	1068.00
IUUC-Dse-031393	Dothistroma septosporum	29.30	4.00e-96	346.00
IUUC-Dme-031666	Drosophila melanogaster	42.27	0.00e+00	689.00
IUUC-Ete-032519	Echinops telfairi	82.36	0.00e+00	714.00
IUUC-Eca-033778	Equus caballus	97.32	0.00e+00	1711.00
IUUC-Eeu-035315	Erinaceus europaeus	82.29	0.00e+00	1217.00
IUUC-Fca-035658	Felis catus	97.88	0.00e+00	1717.00
IUUC-Fal-037638	Ficedula albicollis	82.55	0.00e+00	1982.00
IUUC-Fox-037909	Fusarium oxysporum	29.28	5.00e-94	338.00
IUUC-Fso-038406	Fusarium solani	29.92	4.00e-95	343.00
IUUC-Gmo-039379	Gadus morhua	84.10	0.00e+00	1515.00
IUUC-Ggr-039851	Gaeumannomyces graminis	31.65	6.00e-105	375.00
IUUC-Gga-041136	Gallus gallus	93.36	0.00e+00	1669.00
IUUC-Gac-041910	Gasterosteus aculeatus	84.29	0.00e+00	1519.00
IUUC-Gma-043995	Glycine max	29.43	1.00e-91	331.00
IUUC-Ggo-045354	Gorilla gorilla	91.77	0.00e+00	1583.00
IUUC-Hsa-046880	Homo sapiens	94.63	0.00e+00	2194.00
IUUC-Hvu-047157	Hordeum vulgare	32.94	1.00e-90	327.00
IUUC-Itr-048213	Ictidomys tridecemlineatus	98.20	0.00e+00	640.00
IUUC-Kpa-049211	Komagataella pastoris	27.89	3.00e-75	276.00
IUUC-Lch-050534	Latimeria chalumnae	76.28	0.00e+00	1880.00
IUUC-Lpe-051022	Leersia perrieri	31.02	1.00e-91	331.00
IUUC-Loc-052622	Lepisosteus oculatus	86.33	0.00e+00	1547.00
IUUC-Lma-053241	Leptosphaeria maculans	29.97	1.00e-96	347.00
IUUC-Laf-053646	Loxodonta africana	93.52	0.00e+00	2144.00
IUUC-Mcc-055588	Macaca mulatta	98.10	0.00e+00	1728.00
IUUC-Meu-055999	Macropus eugenii	74.20	0.00e+00	1612.00
IUUC-Mor-057064	Magnaporthe oryzae	30.79	3.00e-105	376.00
IUUC-Mpo-057452	Magnaporthe poae	31.98	1.00e-106	381.00
IUUC-Mtr-058016	Medicago truncatula	29.56	1.00e-97	351.00
IUUC-Mla-058887	Melampsora laricipopulina	32.81	3.00e-107	382.00
IUUC-Mga-059497	Meleagris gallopavo	93.13	0.00e+00	1664.00
IUUC-Mvi-060343	Microbotryum violaceum	34.39	5.00e-110	392.00
IUUC-Mmr-061173	Microcebus murinus	87.25	0.00e+00	1842.00
IUUC-Mdo-062102	Monodelphis domestica	94.94	0.00e+00	1675.00
IUUC-Mmu-063223	Mus musculus	96.87	0.00e+00	1710.00
IUUC-Mac-065531	Musa acuminata	31.18	4.00e-95	342.00
IUUC-Mpu-066624	Mustela putorius furo	66.23	0.00e+00	1038.00
IUUC-Mlu-068018	Myotis lucifugus	97.43	0.00e+00	1713.00
IUUC-Nfi-068590	Neosartorya fischeri	31.30	7.00e-105	375.00
IUUC-Ncr-068901	Neurospora crassa	31.16	2.00e-101	364.00
IUUC-Nle-069605	Nomascus leucogenys	96.90	0.00e+00	1713.00
IUUC-Opr-071011	Ochotona princeps	84.87	0.00e+00	854.00
IUUC-Ont-072304	Oreochromis niloticus	84.26	0.00e+00	1498.00
IUUC-Oan-073410	Ornithorhynchus anatinus	96.85	0.00e+00	1087.00
IUUC-Oba-075073	Oryza barthii	30.99	4.00e-98	352.00
IUUC-Obr-076452	Oryza brachyantha	31.32	3.00e-96	347.00
IUUC-Ogl-077141	Oryza glaberrima	30.99	4.00e-98	352.00
IUUC-Ogu-078116	Oryza glumaepatula	30.99	4.00e-98	353.00
IUUC-Oin-079066	Oryza indica	31.11	2.00e-98	353.00
IUUC-Olo-080253	Oryza longistaminata	29.11	2.00e-84	306.00
IUUC-Ome-081263	Oryza meridionalis	30.87	3.00e-97	350.00
IUUC-Oni-082019	Oryza nivara	31.11	2.00e-98	353.00
IUUC-Opu-083558	Oryza punctata	31.15	8.00e-99	355.00
IUUC-Oru-085002	Oryza rufipogon	30.99	7.00e-98	352.00
IUUC-Osa-085980	Oryza sativa	31.11	2.00e-98	353.00
IUUC-Ola-086323	Oryzias latipes	71.99	0.00e+00	1662.00
IUUC-Olu-087901	Ostreococcus lucimarinus	31.35	2.00e-98	354.00
IUUC-Oga-087969	Otolemur garnettii	94.25	0.00e+00	1619.00
IUUC-Oar-090020	Ovis aries	85.64	0.00e+00	1997.00
IUUC-Ptr-091589	Pan troglodytes	94.56	0.00e+00	2191.00
IUUC-Pan-091718	Papio anubis	98.86	0.00e+00	862.00
IUUC-Psi-093013	Pelodiscus sinensis	84.56	0.00e+00	2041.00
IUUC-Pma-094627	Petromyzon marinus	75.13	0.00e+00	634.00
IUUC-Pno-094840	Phaeosphaeria nodorum	30.17	2.00e-102	367.00
IUUC-Ppa-095989	Physcomitrella patens	29.80	1.00e-97	351.00
IUUC-Pfo-096436	Poecilia formosa	85.48	0.00e+00	1555.00
IUUC-Pab-098275	Pongo abelii	83.96	0.00e+00	1420.00
IUUC-Pop-098797	Populus trichocarpa	30.66	4.00e-100	359.00
IUUC-Pca-100478	Procavia capensis	77.90	0.00e+00	889.00
IUUC-Ppe-101230	Prunus persica	31.17	5.00e-101	362.00
IUUC-Pva-102459	Pteropus vampyrus	90.87	0.00e+00	1984.00
IUUC-Pgr-103485	Puccinia graminis	32.69	7.00e-108	385.00
IUUC-Ptt-104001	Puccinia triticina	42.17	8.00e-46	178.00
IUUC-Pte-104084	Pyrenophora teres	31.61	5.00e-109	389.00
IUUC-Pyt-104484	Pyrenophora triticirepentis	31.49	4.00e-108	385.00
IUUC-Rno-105719	Rattus norvegicus	97.21	0.00e+00	1711.00
IUUC-Sce-106135	Saccharomyces cerevisiae	36.72	2.00e-73	270.00
IUUC-Sha-106760	Sarcophilus harrisii	95.05	0.00e+00	1670.00
IUUC-Sja-107698	Schizosaccharomyces japonicus	33.11	1.00e-115	410.00
IUUC-Spo-108076	Schizosaccharomyces pombe	33.21	7.00e-108	385.00
IUUC-Ssl-108624	Sclerotinia sclerotiorum	29.74	2.00e-101	364.00
IUUC-Smo-108769	Selaginella moellendorffii	29.71	5.00e-90	325.00
IUUC-Sit-109949	Setaria italica	31.42	3.00e-92	333.00
IUUC-Sly-110973	Solanum lycopersicum	31.34	3.00e-84	306.00
IUUC-Stu-112372	Solanum tuberosum	30.57	1.00e-101	364.00
IUUC-Sar-113469	Sorex araneus	89.24	0.00e+00	1008.00
IUUC-Sbi-113828	Sorghum bicolor	31.71	1.00e-96	347.00
IUUC-Sre-114967	Sporisorium reilianum	32.26	6.00e-102	365.00
IUUC-Ssc-115655	Sus scrofa	96.53	0.00e+00	1100.00
IUUC-Tgu-117290	Taeniopygia guttata	83.90	0.00e+00	1948.00
IUUC-Tru-118193	Takifugu rubripes	74.79	0.00e+00	1771.00
IUUC-Tsy-118926	Tarsius syrichta	93.02	0.00e+00	2158.00
IUUC-Tni-120862	Tetraodon nigroviridis	85.34	0.00e+00	1508.00
IUUC-Tca-121096	Theobroma cacao	31.90	2.00e-100	360.00
IUUC-Tre-122104	Trichoderma reesei	30.58	3.00e-99	357.00
IUUC-Tvi-122345	Trichoderma virens	30.98	4.00e-103	370.00
IUUC-Tae-124607	Triticum aestivum	33.07	7.00e-95	342.00
IUUC-Tur-126056	Triticum urartu	32.70	1.00e-94	341.00
IUUC-Tme-127074	Tuber melanosporum	33.17	5.00e-100	358.00
IUUC-Tbe-127533	Tupaia belangeri	90.63	0.00e+00	1861.00
IUUC-Ttr-128757	Tursiops truncatus	91.73	0.00e+00	2132.00
IUUC-Uma-129550	Ustilago maydis	32.82	8.00e-103	368.00
IUUC-Vda-129901	Verticillium dahliae	30.40	2.00e-101	364.00
IUUC-Vpa-130636	Vicugna pacos	96.76	0.00e+00	1031.00
IUUC-Vvi-130891	Vitis vinifera	31.28	4.00e-99	356.00
IUUC-Xtr-132364	Xenopus tropicalis	87.97	0.00e+00	1577.00
IUUC-Xma-133772	Xiphophorus maculatus	85.37	0.00e+00	1551.00
IUUC-Yli-134506	Yarrowia lipolytica	31.26	1.00e-82	301.00
IUUC-Zma-135695	Zea mays	31.19	4.00e-90	326.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence