iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cgl-026643

Ensembl Protein ID

ELA35592

UniProt Accession

L2GAF2; L2GAF2_COLGN

Genbank Protein ID

ELA35592.1

Protein Name

Eukaryotic translation initiation factor 3 subunit F

Genbank Nucleotide ID

KB020561

Gene Name

CGGC5_4676

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CGGC5_4676	ELA35592	ELA35592

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	31.87	5.00e-34	142.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Colletotrichum gloeosporioides

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MAVAETEKFL HLSRPIAPAT VGLQGTIAPL TVNIQPQAIL SILDHAVRRD IRDTQSTRVI 60
GALVGVRSED GTEVEVRSCF AIPHTENEDQ VEVDVDYQKN MLALTLKASP RESLLGWYTT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGTCG CCGAAACTGA GAAGTTCCTC CACCTCTCGC GGCCCATCGC GCCGGCGACG 60
GTTGGCCTTC AGGGCACTAT TGCCCCGCTC ACCGTCAACA TCCAGCCCCA GGTACGAACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0005829--C:cytosol
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0071540--C:eukaryotic translation initiation factor 3 complex, eIF3e
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0005634--C:nucleus
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	28.81	3.00e-28	117.00
IUUC-Aml-001527	Ailuropoda melanoleuca	31.75	8.00e-36	142.00
IUUC-Atr-002686	Amborella trichopoda	32.37	8.00e-27	112.00
IUUC-Apl-003977	Anas platyrhynchos	31.14	4.00e-32	129.00
IUUC-Aca-004335	Anolis carolinensis	31.14	8.00e-36	142.00
IUUC-Aly-005945	Arabidopsis lyrata	32.97	4.00e-32	129.00
IUUC-Ath-007045	Arabidopsis thaliana	33.21	4.00e-32	129.00
IUUC-Acl-008365	Aspergillus clavatus	60.52	7.00e-108	381.00
IUUC-Afl-008742	Aspergillus flavus	58.62	4.00e-104	369.00
IUUC-Afu-009030	Aspergillus fumigatus	61.49	4.00e-110	389.00
IUUC-Ani-009212	Aspergillus nidulans	60.38	3.00e-111	392.00
IUUC-Ang-009712	Aspergillus niger	60.52	1.00e-107	380.00
IUUC-Aor-009885	Aspergillus oryzae	58.62	9.00e-110	387.00
IUUC-Ate-010315	Aspergillus terreus	60.84	6.00e-103	365.00
IUUC-Ame-010801	Astyanax mexicanus	26.69	2.00e-21	94.00
IUUC-Bgr-011982	Blumeria graminis	70.23	8.00e-130	454.00
IUUC-Bta-012804	Bos taurus	31.75	6.00e-36	142.00
IUUC-Bci-013891	Botrytis cinerea	72.78	4.00e-128	449.00
IUUC-Bdi-014328	Brachypodium distachyon	28.62	6.00e-27	112.00
IUUC-Bol-015446	Brassica oleracea	32.36	4.00e-34	136.00
IUUC-Bra-016862	Brassica rapa	32.36	9.00e-34	135.00
IUUC-Cel-018171	Caenorhabditis elegans	27.40	1.00e-26	111.00
IUUC-Cja-019335	Callithrix jacchus	31.75	6.00e-36	142.00
IUUC-Cfa-020138	Canis familiaris	31.75	4.00e-36	143.00
IUUC-Cpo-022109	Cavia porcellus	31.32	3.00e-30	124.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	31.93	3.00e-37	147.00
IUUC-Csa-023994	Chlorocebus sabaeus	31.75	5.00e-36	142.00
IUUC-Cho-024351	Choloepus hoffmanni	24.09	2.00e-14	71.60
IUUC-Cin-025801	Ciona intestinalis	29.60	1.00e-36	145.00
IUUC-Csv-025805	Ciona savignyi	28.43	3.00e-35	140.00
IUUC-Cne-026868	Cryptococcus neoformans	33.45	2.00e-38	150.00
IUUC-Cme-027328	Cyanidioschyzon merolae	24.00	2.00e-11	60.80
IUUC-Dre-028085	Danio rerio	29.86	1.00e-35	141.00
IUUC-Dno-030099	Dasypus novemcinctus	31.39	1.00e-35	141.00
IUUC-Dor-030324	Dipodomys ordii	27.37	2.00e-24	104.00
IUUC-Dse-031314	Dothistroma septosporum	61.18	1.00e-112	397.00
IUUC-Dme-031926	Drosophila melanogaster	26.52	2.00e-29	120.00
IUUC-Ete-032569	Echinops telfairi	29.56	3.00e-31	126.00
IUUC-Eca-033502	Equus caballus	30.42	2.00e-33	134.00
IUUC-Eeu-034883	Erinaceus europaeus	22.87	1.00e-09	54.70
IUUC-Fca-035873	Felis catus	31.75	6.00e-36	142.00
IUUC-Fal-036921	Ficedula albicollis	32.36	6.00e-39	152.00
IUUC-Fox-037765	Fusarium oxysporum	82.64	2.00e-149	520.00
IUUC-Fso-038240	Fusarium solani	83.82	1.00e-150	523.00
IUUC-Gmo-038864	Gadus morhua	29.35	2.00e-34	137.00
IUUC-Ggr-039862	Gaeumannomyces graminis	75.24	1.00e-130	457.00
IUUC-Gga-040952	Gallus gallus	32.36	1.00e-38	151.00
IUUC-Gac-041677	Gasterosteus aculeatus	27.52	8.00e-35	138.00
IUUC-Gma-043061	Glycine max	31.43	3.00e-26	110.00
IUUC-Ggo-045591	Gorilla gorilla	31.75	6.00e-36	143.00
IUUC-Hsa-046860	Homo sapiens	31.75	5.00e-36	142.00
IUUC-Hvu-047410	Hordeum vulgare	26.71	1.00e-14	70.50
IUUC-Itr-048211	Ictidomys tridecemlineatus	31.75	6.00e-36	142.00
IUUC-Lch-049410	Latimeria chalumnae	39.34	7.00e-21	92.00
IUUC-Lpe-051102	Leersia perrieri	29.63	1.00e-26	111.00
IUUC-Loc-052016	Lepisosteus oculatus	25.90	3.00e-23	100.00
IUUC-Lma-053157	Leptosphaeria maculans	61.06	5.00e-115	405.00
IUUC-Laf-054568	Loxodonta africana	31.39	1.00e-35	142.00
IUUC-Mcc-054613	Macaca mulatta	31.75	5.00e-36	143.00
IUUC-Meu-056832	Macropus eugenii	26.77	1.00e-12	64.30
IUUC-Mor-057104	Magnaporthe oryzae	76.28	6.00e-141	491.00
IUUC-Mtr-058445	Medicago truncatula	31.88	9.00e-36	141.00
IUUC-Mla-059038	Melampsora laricipopulina	36.33	2.00e-44	171.00
IUUC-Mga-059548	Meleagris gallopavo	32.07	8.00e-35	138.00
IUUC-Mvi-060520	Microbotryum violaceum	29.67	2.00e-28	117.00
IUUC-Mdo-062376	Monodelphis domestica	31.77	5.00e-37	146.00
IUUC-Mmu-063254	Mus musculus	31.75	7.00e-36	142.00
IUUC-Mac-065635	Musa acuminata	30.77	1.00e-30	124.00
IUUC-Mpu-066314	Mustela putorius furo	31.75	5.00e-36	142.00
IUUC-Mlu-067512	Myotis lucifugus	32.48	7.00e-37	145.00
IUUC-Nfi-068262	Neosartorya fischeri	61.17	2.00e-109	387.00
IUUC-Ncr-068872	Neurospora crassa	75.16	3.00e-127	446.00
IUUC-Nle-070118	Nomascus leucogenys	31.75	9.00e-36	142.00
IUUC-Opr-071228	Ochotona princeps	31.36	2.00e-32	130.00
IUUC-Ont-072600	Oreochromis niloticus	28.99	5.00e-35	139.00
IUUC-Oan-073584	Ornithorhynchus anatinus	32.07	1.00e-33	134.00
IUUC-Ocu-074542	Oryctolagus cuniculus	31.75	3.00e-36	143.00
IUUC-Oba-075923	Oryza barthii	29.33	3.00e-28	117.00
IUUC-Obr-076313	Oryza brachyantha	30.29	5.00e-29	119.00
IUUC-Ogl-076932	Oryza glaberrima	29.33	3.00e-28	117.00
IUUC-Ogu-078152	Oryza glumaepatula	29.33	3.00e-28	117.00
IUUC-Oin-079528	Oryza indica	29.33	3.00e-28	117.00
IUUC-Olo-080401	Oryza longistaminata	29.33	3.00e-28	117.00
IUUC-Ome-081553	Oryza meridionalis	29.33	2.00e-28	117.00
IUUC-Oni-082090	Oryza nivara	28.96	1.00e-28	118.00
IUUC-Opu-083583	Oryza punctata	30.29	5.00e-28	115.00
IUUC-Oru-084492	Oryza rufipogon	29.33	3.00e-28	117.00
IUUC-Osa-085383	Oryza sativa	29.33	3.00e-28	117.00
IUUC-Ola-086835	Oryzias latipes	28.99	1.00e-34	138.00
IUUC-Olu-087716	Ostreococcus lucimarinus	26.79	5.00e-20	89.70
IUUC-Oga-088886	Otolemur garnettii	31.87	3.00e-36	144.00
IUUC-Oar-090079	Ovis aries	31.75	4.00e-36	143.00
IUUC-Ptr-091457	Pan troglodytes	31.75	5.00e-36	142.00
IUUC-Pan-092317	Papio anubis	26.06	2.00e-15	73.60
IUUC-Psi-093129	Pelodiscus sinensis	32.07	3.00e-34	137.00
IUUC-Pma-094488	Petromyzon marinus	30.42	8.00e-39	152.00
IUUC-Pno-095049	Phaeosphaeria nodorum	62.22	1.00e-116	410.00
IUUC-Ppa-095341	Physcomitrella patens	30.30	1.00e-38	150.00
IUUC-Pfo-096286	Poecilia formosa	28.33	1.00e-34	138.00
IUUC-Pab-097765	Pongo abelii	31.75	5.00e-36	142.00
IUUC-Pop-099131	Populus trichocarpa	31.65	2.00e-33	134.00
IUUC-Pca-100524	Procavia capensis	25.42	5.00e-18	82.80
IUUC-Ppe-101934	Prunus persica	33.21	6.00e-38	149.00
IUUC-Pva-102577	Pteropus vampyrus	32.48	1.00e-36	145.00
IUUC-Pgr-103521	Puccinia graminis	31.72	7.00e-37	145.00
IUUC-Pte-104304	Pyrenophora teres	62.42	1.00e-115	407.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	62.42	2.00e-115	406.00
IUUC-Rno-105717	Rattus norvegicus	31.75	5.00e-36	142.00
IUUC-Sha-107190	Sarcophilus harrisii	32.09	5.00e-36	143.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	44.19	1.00e-74	271.00
IUUC-Spo-108355	Schizosaccharomyces pombe	44.12	2.00e-74	270.00
IUUC-Smo-109374	Selaginella moellendorffii	33.46	9.00e-43	165.00
IUUC-Sit-110119	Setaria italica	30.07	9.00e-30	122.00
IUUC-Sly-111570	Solanum lycopersicum	28.08	3.00e-24	103.00
IUUC-Stu-112308	Solanum tuberosum	29.76	4.00e-30	122.00
IUUC-Sar-113515	Sorex araneus	52.17	3.70e-02	29.30
IUUC-Sbi-114605	Sorghum bicolor	30.07	1.00e-29	122.00
IUUC-Sre-114906	Sporisorium reilianum	37.75	5.00e-53	199.00
IUUC-Tgu-117087	Taeniopygia guttata	31.67	8.00e-34	135.00
IUUC-Tru-117700	Takifugu rubripes	30.43	1.00e-35	141.00
IUUC-Tni-120470	Tetraodon nigroviridis	30.43	2.00e-36	143.00
IUUC-Tca-121109	Theobroma cacao	31.97	5.00e-27	112.00
IUUC-Tre-122095	Trichoderma reesei	81.03	2.00e-144	503.00
IUUC-Tvi-122580	Trichoderma virens	81.67	9.00e-146	507.00
IUUC-Tae-125129	Triticum aestivum	30.71	9.00e-31	125.00
IUUC-Tur-126658	Triticum urartu	28.06	4.00e-25	106.00
IUUC-Tme-127043	Tuber melanosporum	55.02	5.00e-98	348.00
IUUC-Tbe-127927	Tupaia belangeri	31.75	6.00e-36	142.00
IUUC-Ttr-129231	Tursiops truncatus	31.75	6.00e-36	142.00
IUUC-Uma-129578	Ustilago maydis	38.08	2.00e-53	200.00
IUUC-Vda-129730	Verticillium dahliae	86.65	4.00e-165	572.00
IUUC-Vvi-130968	Vitis vinifera	31.52	4.00e-31	126.00
IUUC-Xtr-132203	Xenopus tropicalis	29.82	3.00e-36	143.00
IUUC-Xma-133972	Xiphophorus maculatus	28.62	2.00e-34	137.00
IUUC-Yli-134553	Yarrowia lipolytica	41.55	4.00e-60	223.00
IUUC-Zma-134941	Zea mays	28.88	8.00e-25	105.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence