iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.7__1379__AT4G28270.1	fgenesh2_kg.7__1379__AT4G28270.1	fgenesh2_kg.7__1379__AT4G28270.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.90e-06	28.5	18	86
E3 activity/RING/RING	4.20e-10	40.7	21	75

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwl.asggk...............tcPvtrqplteedlvPn 58
           +f C I l+  rdPvv+ +G+ +   +I+kw  a +++               +cPv+++ ++e +lvP 
   Q: 18   DFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTyA-SNNsrqrvdqydskreppKCPVCKSDVSEATLVPI 86
           69******************************63.333367899*************************7 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw..........pglknssskefrCPlCr 46
           C iCl+  +d p+v+ CgH+f+  C++kw          +++++s++   +CP+C+
   Q: 21   CNICLDQVRD-PVVTLCGHLFCWPCIHKWtyasnnsrqrVDQYDSKREPPKCPVCK 75
           99********.999***************9999999999999999999999****7 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MEIENDENDT TLVDSGGDFD CNICLDQVRD PVVTLCGHLF CWPCIHKWTY ASNNSRQRVD 60
QYDSKREPPK CPVCKSDVSE ATLVPIYGRG QKTPQSGSTV PSRPSGPVYD LRGVSQRLGE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTGTATAAT AAGGTCTCAT GCTTCTGCAC CACCCTCGAT CTATATATTC TTACCCCATT 60
CTCTAAACAC AAATAAATCT TCTTCTCTGT TCTTCGACTA TTGTCGCATG AACCAATACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13445--zf-RING_UBOX

SMART

SM00184--RING

Gene Ontology

GO:0005783--C:endoplasmic reticulum
GO:0016021--C:integral component of membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_491946

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007413	Arabidopsis thaliana	94.97	2.00e-100	356.00
IUUC-Bci-013671	Botrytis cinerea	37.04	2.00e-10	59.70
IUUC-Bol-016203	Brassica oleracea	80.22	4.00e-84	303.00
IUUC-Bra-017882	Brassica rapa	79.67	1.00e-83	301.00
IUUC-Sly-111893	Solanum lycopersicum	39.44	4.00e-31	127.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence