iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114369

Ensembl Protein ID

Sb01g012830.1

UniProt Accession

C5WQF5; C5WQF5_SORBI

Genbank Protein ID

EER91124.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G147200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g012830	Sb01g012830.1	Sb01g012830.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.60e-06	27.4	260	330

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlp..sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           +p+e++C + +++Mrd v ++  +  ++  ++I+ ++ +  k c +++ ++  +dl+Pn+tlr++i++ + ++
   Q: 260  LPAELHCRLCKKVMRDAVLTSkcCFDSFCDRCIRDYIITELK-C-ICGVKTLADDLIPNHTLRSTISNMLGTQ 330
           79***************9776433344556788888887777.5.6777777**************9987766 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGVVYYQYKS EKEICSMPVP HAFISVSELK QLIMTSGKHG RGRTRGRATE DIVISNAHTG 60
EEYADERASV PQNTTVLVRR ISIPGQLSEK IVLSPTRKVA EECSVPCKSV VIDSSSKSCS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTGTTG TGTATTATCA ATATAAGAGT GAAAAGGAAA TCTGTTCTAT GCCTGTGCCC 60
CATGCTTTTA TCTCTGTGTC TGAACTCAAG CAGCTTATCA TGACGAGCGG TAAGCACGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014891--DWNN_domain
IPR025829--Zn_knuckle_CX2CX3GHX4C
IPR001878--Znf_CCHC
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51282--DWNN

Pfam

PF08783--DWNN
PF13696--zf-CCHC_2

SMART

SM01180--DWNN
SM00343--ZnF_C2HC

Gene Ontology

GO:0005634--C:nucleus
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding

KEGG

sbi:SORBI_01g012830

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bci-013880	Botrytis cinerea	23.53	7.00e-12	65.10
IUUC-Bdi-014252	Brachypodium distachyon	57.73	2.00e-151	528.00
IUUC-Hvu-047050	Hordeum vulgare	55.29	5.00e-163	566.00
IUUC-Obr-076809	Oryza brachyantha	56.55	9.00e-147	513.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence