iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113905

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G040600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g003480	Sb02g003480.1	Sb02g003480.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.30e-06	27.4	32	72

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C+iCle f  +d+  v++C H fh++C+  w       +++ +CP C
   Q: 32   CSICLEAFsdSDPSAVTSCRHEFHLQCILEW------CQRSSQCPMC 72
           ********77777999***************......********** PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDAGASAAQM EKHSSAAAFV EGGVQDACDD ACSICLEAFS DSDPSAVTSC RHEFHLQCIL 60
EWCQRSSQCP MCWQAISMKD PMSQELLEAV EEERNAQENH ARTTTIFRHP LLGDFEVPVD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGCGG GGGCGTCGGC GGCGCAGATG GAGAAGCACT CGTCGGCGGC GGCCTTCGTG 60
GAGGGCGGCG TCCAGGACGC GTGCGACGAC GCCTGCAGCA TCTGCCTCGA GGCCTTCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_02g003480

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002655	Amborella trichopoda	51.86	8.00e-89	319.00
IUUC-Aly-005899	Arabidopsis lyrata	66.10	3.00e-22	98.60
IUUC-Ath-007279	Arabidopsis thaliana	69.70	7.00e-27	113.00
IUUC-Bci-013799	Botrytis cinerea	52.78	8.00e-07	47.40
IUUC-Bol-015999	Brassica oleracea	64.41	2.00e-22	99.00
IUUC-Bra-017518	Brassica rapa	62.90	5.00e-23	100.00
IUUC-Gma-043782	Glycine max	53.21	3.00e-85	307.00
IUUC-Mtr-058591	Medicago truncatula	59.04	4.00e-93	333.00
IUUC-Ppa-095686	Physcomitrella patens	39.03	2.00e-51	195.00
IUUC-Pop-099767	Populus trichocarpa	41.46	3.00e-53	201.00
IUUC-Ppe-101489	Prunus persica	52.50	1.00e-90	325.00
IUUC-Pte-104366	Pyrenophora teres	29.67	2.00e-06	45.10
IUUC-Smo-109592	Selaginella moellendorffii	72.09	2.00e-36	142.00
IUUC-Sit-110350	Setaria italica	73.31	2.00e-129	454.00
IUUC-Stu-112642	Solanum tuberosum	50.97	1.00e-78	286.00
IUUC-Tca-121041	Theobroma cacao	56.15	1.00e-98	352.00
IUUC-Tur-126169	Triticum urartu	58.09	8.00e-109	385.00
IUUC-Vvi-131270	Vitis vinifera	38.85	1.00e-43	169.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence