iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015433

Ensembl Protein ID

Bo1g010290.1

UniProt Accession

A0A0D3A2K4; A0A0D3A2K4_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo1g010290	Bo1g010290.1	Bo1g010290.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-23	83.7	688	717
UBD/Beta-Prp	1.20e-46	160.7	640	775

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           Ht+ +t+++f ++ ++l+++s D+t++vWD
   Q: 688  HTAMITDVRFsPNlPRLATSSFDKTVRVWD 717
           88889******999**************** PP

UBD/Beta-Prp

   S: 45   lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvn 141
           + s+   +++vt++ fs dgk+l++++ D+ + +w  +t k+  tl++h++++++++fsp+  +l++ s d+t+rvwd +++  +   + gh+++++
   Q: 640  VNSVRASTSKVTCCHFSLDGKMLASAGHDKKAVIWHTDTMKPKTTLEEHTAMITDVRFSPNLPRLATSSFDKTVRVWDADNKGYSLRNFIGHSSMIT 736
           3344444445788888888888888888888888888888888888888888888888887788888888888888877664433347778888888 PP
   S: 142  cvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltggh 179
           +v +hp++ +l+ s+ +D+ +r W++++g++ r  +gg 
   Q: 737  SVDFHPNKdDLICSCDDDGEIRYWSINNGTCSRVYKGGS 775
           888888777788888888888888888888877776644 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MSQTNWEADK MLDVYIHDYL VKRDLKATAQ AFQAEGKISL DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNEK HSEVAASYIE TQMMKARDQQ MQQGQHPQVS QQQHQQQQQQ QIQMQQLLLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTCAGA CCAATTGGGA AGCTGATAAA ATGTGAGTCC TTTTTTTTTT TTAATTTTGA 60
TTTTGATATT TGTGCTGATT GCTTTACCGT AGAGTCTTTA ATTTTGGGTT TAGGTTTTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR023413--GFP-like
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bra-017573	Brassica rapa	95.93	0.00e+00	1138.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence