iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.7__1148__AT4G30370.1	fgenesh2_kg.7__1148__AT4G30370.1	fgenesh2_kg.7__1148__AT4G30370.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.60e-07	30.4	115	157

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C +C + f++g   + lp CgHvfh++C+  w        k  +CP+Cr
   Q: 115  CVVCIDGFRQGqwCRKLPrCGHVFHRKCVDLW------LIKVSTCPICR 157
           9*******66666667777*************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSIHIPYDGS NSGEPSPSPP PPKANTNNLP TKILSNFLIG LIMIPVAVTA FLFILTSLGF 60
TFFFAFYWFL QRNYRHRLRR HRRHQYSDGL SPRCVKRLPQ FKFCEPNTEY GSDDCVVCID 120

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Nucleotide Sequence
(Fasta)

AAAAAGATGT CCGAATATTC CCGCATATAA ATATCTATCA GACAGCATAC TTTGAATCCA 60
TTAAAAAAAT TTCGATCTTT AAAATCTCTC CTTTATCTAG CCCGTGAAAA CAGGATTAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding
GO:0010200--P:response to chitin

KEGG

aly:ARALYDRAFT_491715

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006633	Arabidopsis thaliana	90.48	3.00e-69	253.00
IUUC-Bol-015588	Brassica oleracea	67.07	1.00e-47	181.00
IUUC-Bra-017231	Brassica rapa	66.87	9.00e-48	181.00
IUUC-Cfa-020557	Canis familiaris	42.31	9.00e-12	64.70
IUUC-Sly-111550	Solanum lycopersicum	53.97	7.00e-17	79.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence