iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131285

UUCD1 version

UUC-ViV-00486

Ensembl Protein ID

VIT_18s0001g09700.t01

UniProt Accession

F6GZW7; F6GZW7_VITVI

Genbank Protein ID

CCB45788.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595227

Gene Name

SLY1; VIT_18s0001g09700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_18s0001g09700	VIT_18s0001g09700.t01	VIT_18s0001g09700.t01

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	59.72	4.00e-43	171.00	IUUC-Ath-007482

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MKRPFVADDD LESADQKMKN PKLEDDEEDG EVRGETTGFV NLDENLLYEV LKHVDARTLA 60
IAGCVSKLWH RTSQDERLWE LICTRHWANI GCGNQQVRSV VLALGGFRRL HSLYLWPLSK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCTGCAACC GCCTCGTTAT TCCCTCTTCT CCGCCACTCT ACATTCATTT TCCTCTCTTT 60
CTTTTTCCCC TTTTTTCACC TTTGCCTCTT TTATTGATTC ATTAATAAAT CATCCAAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

Pfam

PF00646--F-box

SMART

SM00256--FBOX

Gene Ontology

GO:0005634--C:nucleus
GO:0019005--C:SCF ubiquitin ligase complex
GO:0010162--P:seed dormancy process
GO:0009845--P:seed germination

KEGG

vvi:100266007

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002597	Amborella trichopoda	59.12	2.00e-38	150.00
IUUC-Aly-006435	Arabidopsis lyrata	56.28	1.00e-50	190.00
IUUC-Ath-007482	Arabidopsis thaliana	57.14	1.00e-51	194.00
IUUC-Bdi-014906	Brachypodium distachyon	40.94	4.00e-28	117.00
IUUC-Bol-016273	Brassica oleracea	57.80	2.00e-45	173.00
IUUC-Bra-016627	Brassica rapa	56.59	8.00e-46	174.00
IUUC-Eeu-035144	Erinaceus europaeus	40.00	4.90e-02	30.80
IUUC-Gac-041737	Gasterosteus aculeatus	38.30	1.00e-04	40.00
IUUC-Gma-043301	Glycine max	61.54	8.00e-55	205.00
IUUC-Hsa-046251	Homo sapiens	31.25	5.00e-05	39.70
IUUC-Hvu-047070	Hordeum vulgare	39.71	8.00e-23	99.40
IUUC-Mtr-057791	Medicago truncatula	60.44	7.00e-53	198.00
IUUC-Mac-064781	Musa acuminata	52.86	6.00e-33	132.00
IUUC-Opr-070849	Ochotona princeps	31.25	8.00e-05	40.00
IUUC-Ont-071234	Oreochromis niloticus	37.04	2.00e-04	38.90
IUUC-Oan-072882	Ornithorhynchus anatinus	32.10	4.00e-05	40.00
IUUC-Obr-076578	Oryza brachyantha	43.80	2.00e-31	128.00
IUUC-Ogl-077389	Oryza glaberrima	40.88	9.00e-19	85.90
IUUC-Oin-079212	Oryza indica	40.88	9.00e-19	85.90
IUUC-Pma-094686	Petromyzon marinus	28.07	1.80e-02	31.20
IUUC-Pfo-096195	Poecilia formosa	38.89	9.00e-05	40.00
IUUC-Pop-098990	Populus trichocarpa	64.89	8.00e-62	228.00
IUUC-Ppe-102068	Prunus persica	66.22	1.00e-48	184.00
IUUC-Smo-108701	Selaginella moellendorffii	39.72	1.00e-20	91.70
IUUC-Sit-110635	Setaria italica	48.89	5.00e-22	96.70
IUUC-Sly-111686	Solanum lycopersicum	63.28	1.00e-28	118.00
IUUC-Stu-111934	Solanum tuberosum	52.69	4.00e-28	116.00
IUUC-Sbi-113872	Sorghum bicolor	54.67	2.00e-16	78.20
IUUC-Tni-119768	Tetraodon nigroviridis	39.62	3.00e-04	38.50
IUUC-Tca-121336	Theobroma cacao	65.41	4.00e-62	229.00
IUUC-Xma-133836	Xiphophorus maculatus	38.89	9.00e-05	40.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence