iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Tag

Content

iUUCD ID

IUUC-Bra-016919

Ensembl Protein ID

UniProt Accession

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra036865	Bra036865.1	Bra036865.1-P

Status

Unreviewed

Classification

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brassica rapa

Protein Sequence
(Fasta)

MAMNSIRHLY PAATTAVDSL GSSFCKLHGA TSLRFLRYSP SISLGDVRRF GFCSTRKVKL 60
CRGSGRDENW NRTQKQNQLK PVLNHRKGET FSDLGVTSGE NGDGGSSTME RIVEKLKKFG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGATGA ATTCAATTCG CCATCTTTAT CCAGCAGCCA CTACTGCGGT CGATTCGTTG 60
GGAAGCTCCT TCTGTAAGCT CCACGGAGCC ACTTCCCTCC GATTCTTAAG GTACAGTCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR033262--CFM3
IPR001890--RNA-binding_CRM

PROSITE

Pfam

PF01985--CRS1_YhbY

SMART

SM01103--CRS1_YhbY

Gene Ontology

GO:0009507--C:chloroplast
GO:0003723--F:RNA binding
GO:0000373--P:Group II intron splicing
GO:0048316--P:seed development

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005403	Arabidopsis lyrata	71.08	0.00e+00	1107.00
IUUC-Ame-011464	Astyanax mexicanus	40.62	2.00e-01	30.00
IUUC-Bol-016598	Brassica oleracea	92.89	0.00e+00	1360.00
IUUC-Ggo-044933	Gorilla gorilla	30.99	6.70e-02	32.30
IUUC-Hsa-046924	Homo sapiens	30.99	6.90e-02	32.30
IUUC-Ptr-091275	Pan troglodytes	30.99	6.40e-02	32.30
IUUC-Psi-093653	Pelodiscus sinensis	27.94	7.80e-01	28.90
IUUC-Spo-108287	Schizosaccharomyces pombe	21.60	1.70e-01	30.40
IUUC-Smo-109291	Selaginella moellendorffii	44.69	2.00e-123	436.00
IUUC-Sit-110117	Setaria italica	26.19	2.00e-05	43.90

Created Date

25-Jun-2017

Protein Fasta Sequence