iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121745

Ensembl Protein ID

EOY34066

UniProt Accession

A0A061GX55; A0A061GX55_THECC

Genbank Protein ID

EOY34066.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM001887

Gene Name

TCM_041859

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_041859	EOY34067	EOY34067
TCM_041859	EOY34066	EOY34066

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.40e-34	117.3	285	357

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+CpIslelM+dPv++++G+ty+rs+Iekwl++g+ tcP+t+q+l++  l+Pn++lr+li +wce+n++
   Q: 285  IPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLQQGHGTCPKTQQTLSSPALTPNYVLRSLIAQWCEANGI 357
           89********************************************************************986 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MEEEKGALVQ SLIDAVNQIA SIGDYRCPVK KQYCNLARRL KLLTPMFEEI RESKEQIPEE 60
TVKALVSLKE ALVSAKELLR FGSEGSKIYL FALVIYGLES NLCHHSNSNL RLAVVNLVLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTCAAAGGT AGACATGGAA AAATTTCAAA TTTATCTGAA AAAACCTGCA TTTCACTGAC 60
TGCGAGACGA GGTTAGTTTA ACTGAAAATC AACCAACCCA ATTCCAACCC TAGCCGAGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR008709--Neurochondrin
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF05536--Neurochondrin
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000439	Aegilops tauschii	68.37	0.00e+00	733.00
IUUC-Aly-005681	Arabidopsis lyrata	69.89	0.00e+00	899.00
IUUC-Ath-007618	Arabidopsis thaliana	69.89	0.00e+00	899.00
IUUC-Bdi-014772	Brachypodium distachyon	62.99	0.00e+00	760.00
IUUC-Bol-015254	Brassica oleracea	70.11	0.00e+00	898.00
IUUC-Bra-017857	Brassica rapa	69.50	0.00e+00	882.00
IUUC-Gma-043064	Glycine max	75.23	0.00e+00	995.00
IUUC-Hvu-047052	Hordeum vulgare	68.83	0.00e+00	687.00
IUUC-Lpe-051284	Leersia perrieri	61.93	0.00e+00	751.00
IUUC-Mtr-058332	Medicago truncatula	73.68	0.00e+00	974.00
IUUC-Mac-065438	Musa acuminata	61.09	0.00e+00	743.00
IUUC-Oba-075184	Oryza barthii	61.65	0.00e+00	764.00
IUUC-Obr-076590	Oryza brachyantha	60.88	0.00e+00	740.00
IUUC-Ogl-077386	Oryza glaberrima	61.65	0.00e+00	764.00
IUUC-Ogu-078326	Oryza glumaepatula	61.65	0.00e+00	766.00
IUUC-Oin-079687	Oryza indica	61.65	0.00e+00	763.00
IUUC-Olo-081001	Oryza longistaminata	61.65	0.00e+00	764.00
IUUC-Ome-081417	Oryza meridionalis	61.22	0.00e+00	772.00
IUUC-Oni-082379	Oryza nivara	61.65	0.00e+00	764.00
IUUC-Opu-083774	Oryza punctata	60.92	0.00e+00	766.00
IUUC-Oru-084885	Oryza rufipogon	61.49	0.00e+00	762.00
IUUC-Osa-085946	Oryza sativa	61.18	0.00e+00	758.00
IUUC-Ppa-095383	Physcomitrella patens	50.86	2.00e-178	618.00
IUUC-Pop-098809	Populus trichocarpa	81.00	0.00e+00	1078.00
IUUC-Ppe-102057	Prunus persica	85.69	0.00e+00	937.00
IUUC-Sit-110392	Setaria italica	70.13	0.00e+00	750.00
IUUC-Sly-111594	Solanum lycopersicum	73.94	0.00e+00	969.00
IUUC-Stu-112876	Solanum tuberosum	73.48	0.00e+00	954.00
IUUC-Sbi-113843	Sorghum bicolor	60.63	0.00e+00	728.00
IUUC-Tae-123188	Triticum aestivum	63.72	0.00e+00	745.00
IUUC-Tur-126448	Triticum urartu	65.49	0.00e+00	749.00
IUUC-Vvi-131752	Vitis vinifera	81.39	0.00e+00	1019.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence