iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-100029

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000348

Gene Name

POPTRDRAFT_570079; POPTR_0012s08100g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0012s08100	POPTR_0012s08100.1	POPTR_0012s08100.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-07	33.3	246	287

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle+f   ++++ lpC H fh +C+  w       + + +CP Cr
   Q: 246  CLICLEEFyvGNEVRGLPCAHNFHVECIDEW------LRLNVKCPRCR 287
           ********99666******************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAMRGIDFKW YDGFFLSMLA TKIVCSFFNN VTHRIIVAIN WRRYHICTYP LHIWIMVDYT 60
TVFVFRLLMF IDNGLAAGMG LDFGRQQRYA RFCGRIVVLS ILSLLLYPFL WAWTITGTLW 120

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Nucleotide Sequence
(Fasta)

AAAATCTTCT CGTCAATCTC TTCTCCTCCC GCAATCCAGA CTTCAATCAC CTCTCTCCTG 60
TTTTTAAAAA CTCTCCTTCT CACTACTGTT AAACCAGTTT CAGTTGCTTG TAATTACTGC 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0012s08100g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-005174	Anolis carolinensis	44.62	1.00e-12	64.30
IUUC-Bol-015136	Brassica oleracea	72.88	9.00e-152	528.00
IUUC-Bra-018024	Brassica rapa	69.29	9.00e-143	499.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence