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Tag Content
iUUCD ID IUUC-Aly-006061
Ensembl Protein ID fgenesh2_kg.5__1268__AT3G49180.1
UniProt Accession D7LSF3; D7LSF3_ARALL
Genbank Protein ID EFH52213.1
Protein Name Putative uncharacterized protein
Genbank Nucleotide ID GL348717
Gene Name RID3; ARALYDRAFT_485276
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh2_kg.5__1268__AT3G49180.1 fgenesh2_kg.5__1268__AT3G49180.1 fgenesh2_kg.5__1268__AT3G49180.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 8.80e-29 99.0 119 150
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDl 30
           gH  svtcl f  +d ll+sGs Dg+++vW+l
   Q: 119  GHYRSVTCLVFsgDDSLLISGSQDGSVRVWSL 150
           7999*******96669**************96 PP
   
Organism Arabidopsis lyrata
Protein Sequence
(Fasta)
MEISVIASSS IDEGIGSWDL KTGKEQLRFK QCASPAHGLT AVGEKFLASS QLRKESTSSG 60
SIFYWSWTKP QVEVRSFPVE PIKALVANNE GTYLVGGGSS GDIYLWEVAT GKLLKKWHGH 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Aly-006061|E3,WD_repeat|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TAGATATCAC AAAACCCAGA CTTTGGAATC AGTTTCTCTT TTTTTCCCTC TTTCTCTTAG 60
CGATGGAGAT TTCTGTAATC GCTTCTTCGT CAATCGATGA AGGAATTGGA AGCTGGGATC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Aly-006061|E3,WD_repeat|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:1902184--P:negative regulation of shoot apical meristem development
KEGG aly:ARALYDRAFT_485276
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001040 Aegilops tauschii 42.57 3.00e-78 284.00
IUUC-Aml-001819 Ailuropoda melanoleuca 30.34 2.00e-27 115.00
IUUC-Atr-002688 Amborella trichopoda 49.39 3.00e-106 378.00
IUUC-Apl-004023 Anas platyrhynchos 32.70 4.00e-17 81.30
IUUC-Ath-007111 Arabidopsis thaliana 88.61 0.00e+00 800.00
IUUC-Acl-008357 Aspergillus clavatus 30.25 7.00e-22 98.20
IUUC-Afl-008564 Aspergillus flavus 26.27 4.00e-21 95.90
IUUC-Afu-009113 Aspergillus fumigatus 29.89 5.00e-23 102.00
IUUC-Ani-009132 Aspergillus nidulans 31.37 4.00e-24 105.00
IUUC-Ang-009586 Aspergillus niger 27.70 6.00e-24 104.00
IUUC-Aor-009882 Aspergillus oryzae 26.27 3.00e-21 96.30
IUUC-Ate-010249 Aspergillus terreus 25.07 2.00e-19 90.50
IUUC-Ame-010912 Astyanax mexicanus 29.97 1.00e-33 137.00
IUUC-Bta-013402 Bos taurus 31.29 3.00e-32 132.00
IUUC-Bci-013791 Botrytis cinerea 27.27 5.00e-17 81.60
IUUC-Bdi-015054 Brachypodium distachyon 43.72 2.00e-90 325.00
IUUC-Bol-016342 Brassica oleracea 81.19 0.00e+00 660.00
IUUC-Bra-016967 Brassica rapa 80.71 0.00e+00 657.00
IUUC-Cja-019758 Callithrix jacchus 30.82 2.00e-31 129.00
IUUC-Cfa-020495 Canis familiaris 33.47 9.00e-28 117.00
IUUC-Cpo-021438 Cavia porcellus 32.02 5.00e-35 140.00
IUUC-Csa-023416 Chlorocebus sabaeus 30.96 2.00e-32 132.00
IUUC-Csv-025918 Ciona savignyi 25.70 7.00e-25 107.00
IUUC-Cgl-026618 Colletotrichum gloeosporioides 25.45 1.00e-20 93.60
IUUC-Cne-026843 Cryptococcus neoformans 30.30 1.00e-22 100.00
IUUC-Dre-027560 Danio rerio 29.68 2.00e-33 135.00
IUUC-Dno-029315 Dasypus novemcinctus 32.90 1.00e-40 159.00
IUUC-Dor-030935 Dipodomys ordii 31.48 3.00e-37 148.00
IUUC-Dse-031492 Dothistroma septosporum 23.76 1.00e-21 97.40
IUUC-Dme-032059 Drosophila melanogaster 31.83 3.00e-36 145.00
IUUC-Fca-036068 Felis catus 30.84 4.00e-28 118.00
IUUC-Fal-037467 Ficedula albicollis 30.90 1.00e-35 142.00
IUUC-Fox-037903 Fusarium oxysporum 27.12 4.00e-23 101.00
IUUC-Gmo-039323 Gadus morhua 30.03 1.00e-24 107.00
IUUC-Ggr-040050 Gaeumannomyces graminis 26.67 1.00e-11 63.90
IUUC-Gga-040563 Gallus gallus 32.68 5.00e-29 121.00
IUUC-Gac-042641 Gasterosteus aculeatus 31.09 2.00e-33 135.00
IUUC-Gma-043856 Glycine max 55.73 3.00e-144 504.00
IUUC-Ggo-045137 Gorilla gorilla 31.15 5.00e-28 117.00
IUUC-Hsa-046335 Homo sapiens 30.84 2.00e-27 115.00
IUUC-Hvu-047685 Hordeum vulgare 47.96 2.00e-80 292.00
IUUC-Itr-048032 Ictidomys tridecemlineatus 30.28 2.00e-37 149.00
IUUC-Kpa-049129 Komagataella pastoris 28.66 6.00e-31 127.00
IUUC-Lch-049532 Latimeria chalumnae 31.27 9.00e-37 147.00
IUUC-Lpe-051321 Leersia perrieri 39.34 6.00e-78 283.00
IUUC-Loc-052471 Lepisosteus oculatus 26.63 1.00e-25 110.00
IUUC-Lma-053091 Leptosphaeria maculans 24.93 3.00e-19 89.40
IUUC-Laf-054331 Loxodonta africana 31.92 9.00e-31 127.00
IUUC-Mcc-055803 Macaca mulatta 30.96 2.00e-32 132.00
IUUC-Meu-056090 Macropus eugenii 30.45 2.00e-33 135.00
IUUC-Mor-057160 Magnaporthe oryzae 26.61 2.00e-21 95.90
IUUC-Mtr-058800 Medicago truncatula 57.34 2.00e-143 501.00
IUUC-Mla-058943 Melampsora laricipopulina 32.74 4.00e-22 99.00
IUUC-Mga-059282 Meleagris gallopavo 32.13 7.00e-34 137.00
IUUC-Mvi-060315 Microbotryum violaceum 37.85 4.00e-28 118.00
IUUC-Mmr-061127 Microcebus murinus 30.27 4.00e-33 134.00
IUUC-Mdo-062350 Monodelphis domestica 29.90 9.00e-33 134.00
IUUC-Mmu-063706 Mus musculus 31.21 3.00e-35 142.00
IUUC-Mac-065066 Musa acuminata 63.05 1.00e-76 278.00
IUUC-Mpu-066711 Mustela putorius furo 30.96 1.00e-37 150.00
IUUC-Mlu-068121 Myotis lucifugus 34.57 4.00e-30 124.00
IUUC-Nfi-068454 Neosartorya fischeri 27.60 1.00e-22 100.00
IUUC-Ncr-068914 Neurospora crassa 24.14 2.00e-18 85.90
IUUC-Nle-069518 Nomascus leucogenys 32.28 3.00e-30 125.00
IUUC-Ont-071435 Oreochromis niloticus 33.99 4.00e-33 135.00
IUUC-Oba-075873 Oryza barthii 41.28 2.00e-92 332.00
IUUC-Obr-076097 Oryza brachyantha 32.83 8.00e-45 174.00
IUUC-Ogl-077840 Oryza glaberrima 41.57 5.00e-94 337.00
IUUC-Ogu-077988 Oryza glumaepatula 41.28 2.00e-92 332.00
IUUC-Oin-079237 Oryza indica 36.97 2.00e-56 211.00
IUUC-Olo-080415 Oryza longistaminata 40.64 2.00e-88 320.00
IUUC-Ome-081952 Oryza meridionalis 41.74 3.00e-92 331.00
IUUC-Oni-082300 Oryza nivara 41.28 2.00e-92 332.00
IUUC-Opu-083436 Oryza punctata 35.78 6.00e-53 201.00
IUUC-Oru-085164 Oryza rufipogon 41.88 2.00e-93 335.00
IUUC-Osa-086129 Oryza sativa 41.57 1.00e-91 329.00
IUUC-Ola-086571 Oryzias latipes 32.13 4.00e-33 134.00
IUUC-Oga-088561 Otolemur garnettii 31.17 8.00e-34 137.00
IUUC-Oar-090131 Ovis aries 31.60 4.00e-27 115.00
IUUC-Ptr-091301 Pan troglodytes 26.43 1.00e-20 93.20
IUUC-Pan-092810 Papio anubis 30.96 8.00e-33 134.00
IUUC-Psi-093091 Pelodiscus sinensis 30.04 2.00e-24 106.00
IUUC-Ppa-095317 Physcomitrella patens 40.73 2.00e-63 236.00
IUUC-Pfo-096996 Poecilia formosa 31.72 9.00e-34 137.00
IUUC-Pab-097747 Pongo abelii 31.02 1.00e-30 126.00
IUUC-Pop-099609 Populus trichocarpa 57.69 4.00e-146 510.00
IUUC-Pca-100972 Procavia capensis 32.67 9.00e-28 117.00
IUUC-Ppe-101904 Prunus persica 56.79 1.00e-140 492.00
IUUC-Pva-102700 Pteropus vampyrus 32.30 2.00e-20 92.80
IUUC-Pgr-103616 Puccinia graminis 37.57 1.00e-24 107.00
IUUC-Ptt-103954 Puccinia triticina 36.99 7.00e-24 104.00
IUUC-Pte-104120 Pyrenophora teres 23.08 1.00e-17 84.00
IUUC-Pyt-104558 Pyrenophora triticirepentis 23.72 6.00e-18 85.10
IUUC-Rno-104933 Rattus norvegicus 31.72 2.00e-36 146.00
IUUC-Sha-107636 Sarcophilus harrisii 30.23 1.00e-34 140.00
IUUC-Sja-107783 Schizosaccharomyces japonicus 26.98 1.00e-27 116.00
IUUC-Spo-108192 Schizosaccharomyces pombe 27.36 5.00e-27 114.00
IUUC-Ssl-108384 Sclerotinia sclerotiorum 26.17 5.00e-17 81.60
IUUC-Smo-109498 Selaginella moellendorffii 41.69 2.00e-85 308.00
IUUC-Sit-110770 Setaria italica 41.19 3.00e-88 317.00
IUUC-Sly-111453 Solanum lycopersicum 57.80 3.00e-145 507.00
IUUC-Stu-112384 Solanum tuberosum 59.00 1.00e-133 469.00
IUUC-Sbi-113952 Sorghum bicolor 41.09 1.00e-89 322.00
IUUC-Sre-115223 Sporisorium reilianum 32.42 3.00e-21 95.90
IUUC-Ssc-115627 Sus scrofa 30.65 2.00e-31 129.00
IUUC-Tgu-117404 Taeniopygia guttata 31.88 2.00e-35 142.00
IUUC-Tru-117629 Takifugu rubripes 32.02 1.00e-31 129.00
IUUC-Tni-119839 Tetraodon nigroviridis 30.07 1.00e-25 110.00
IUUC-Tca-121766 Theobroma cacao 61.04 5.00e-158 550.00
IUUC-Tre-122047 Trichoderma reesei 25.00 4.00e-24 105.00
IUUC-Tvi-122668 Trichoderma virens 25.16 2.00e-23 102.00
IUUC-Tae-125634 Triticum aestivum 43.97 3.00e-84 305.00
IUUC-Tur-126673 Triticum urartu 40.50 7.00e-71 260.00
IUUC-Tme-127070 Tuber melanosporum 26.38 1.00e-25 110.00
IUUC-Ttr-128735 Tursiops truncatus 30.53 7.00e-29 120.00
IUUC-Uma-129521 Ustilago maydis 32.42 1.00e-21 97.40
IUUC-Vvi-130872 Vitis vinifera 57.37 3.00e-139 487.00
IUUC-Xtr-131838 Xenopus tropicalis 36.89 3.00e-35 142.00
IUUC-Xma-134106 Xiphophorus maculatus 31.48 7.00e-34 137.00
IUUC-Yli-134551 Yarrowia lipolytica 25.33 4.00e-23 101.00
IUUC-Zma-134703 Zea mays 39.67 7.00e-86 310.00
Created Date 25-Jun-2017

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