iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017018

Ensembl Protein ID

Bra031521.1-P

UniProt Accession

M4ERU4; M4ERU4_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra031521	Bra031521.1	Bra031521.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.20e-25	90.4	274	342

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           ++++CpIsle+M+dPvvl++G+tydrssI+kw++ g+ tcP+t++ l ++ lv n ++++liq++ +++
   Q: 274  DDLRCPISLEIMNDPVVLETGHTYDRSSIAKWFSAGNITCPKTGKNLVSTVLVGNVSVKQLIQSYFKQE 342
           689*************************************************************99987 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MILTQNRRIL TFTAVHPCES VSITTLIDSL IKIAGEILSF KSKHFSTNKR SVKETLRHVL 60
SLLIVFQEIR VGLIPAGRSF PRSAILSLSE LHVIFQKLMF LLEDCTREGG KLYMLTNSDQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATCCTCA CACAAAACCG TCGGATTCTA ACTTTTACGG CGGTACATCC ATGCGAATCA 60
GTCTCCATAA CCACTCTCAT TGATTCACTG ATAAAAATTG CCGGCGAGAT TCTCAGCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0010029--P:regulation of seed germination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002640	Amborella trichopoda	33.67	4.00e-81	295.00
IUUC-Aly-006337	Arabidopsis lyrata	76.27	0.00e+00	955.00
IUUC-Ath-007598	Arabidopsis thaliana	77.16	0.00e+00	971.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence