iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__2157__AT3G19380.1	fgenesh2_kg.3__2157__AT3G19380.1	fgenesh2_kg.3__2157__AT3G19380.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.10e-25	88.7	1	61

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 15   MrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawceenss 74
           M+dPv++++G+tydr+sIe w++ g++ tcPvtr+pl++ +l+Pn+tlrrliq+wc +n+s
   Q: 1    MQDPVTVCTGQTYDRASIESWVSIGNNtTCPVTRAPLSDFTLIPNHTLRRLIQEWCVANRS 61
           9*********************988888*****************************9986 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MQDPVTVCTG QTYDRASIES WVSIGNNTTC PVTRAPLSDF TLIPNHTLRR LIQEWCVANR 60
SNGVERIPTP KQPADPTSVR ALLSQASAIT GTHVSVRSRA AALRRLRGFA RDSDKNRVLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAAACATAT TTACGTAGAT GGCATCTCAT GATGTCATCA CTTAATTAAA AACTAACATC 60
AAGAATTTTA ACATAATTAT TAAATTAAAA AATCCAGCAG GTAACAAAGT TATAAATGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0010200--P:response to chitin

KEGG

aly:ARALYDRAFT_479456

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006933	Arabidopsis thaliana	97.48	0.00e+00	649.00
IUUC-Bol-015539	Brassica oleracea	85.25	4.00e-158	550.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence