iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099155

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_762468; POPTR_0006s09770g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s09770	POPTR_0006s09770.1	POPTR_0006s09770.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.80e-23	80.5	398	427
UBD/Beta-Prp	2.10e-44	153.0	537	759

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf..sd.tllvsGsdDgtikvWDlr 31
           s  c+a   s+   ++++s Dgti++WDl+
   Q: 398  SLACVARgcSGgVSFATCSADGTIRLWDLT 427
           555655346555779*************86 PP

UBD/Beta-Prp

   S: 107  dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..............ktgkllrtltgghtdsv 183
            +l+sG++dr+i+++d+e +  l    + h+++v++v++   g  + s+s+Dr + + d+              +          + ++ v
   Q: 537  CFLASGGRDRIIHLYDVERNFDLIGSIDDHSAAVTSVKLTFHGHKILSCSADRSLVFRDVcvvescckisrrhhQ---------MASHGTV 618
           467777777777777777777777777777777777777777777777777777777777644433333333330.........3334444 PP
   S: 184  yslsfdsng.................................kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgs 241
           y +++d+ +                                  +l+    ++++ ++d  +ge v +  gh + ++ v f+p+ +++vs++
   Q: 619  YDMALDPAMefvvtvgqlgnaasscseaesnhvlqvsmdpscSYLACSYSNKSLCMYDAISGELVTRAVGHGEVITGVIFLPDCKHVVSVG 709
           44444444444444444444444444444444444444444499999999***************************************** PP
   S: 242  sDgsiriWdlrsgdllktlqlhnssvisvavlsfg.....dnvlvlgsed 286
            D  i++W l s+   ++lq+ +++ ++ +  ++g     ++++++ +ed
   Q: 710  GDSCIFVWKLPSRMSSRMLQRMKENAVPLSPKDLGppsafNQIVFSEAED 759
           ********************999888777663333334445555555555 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MKINNRKLKK SETSSSSKLV LEEIIGLTTK NANGLASNTS TARFAYIAGC VVVVYNVDST 60
TQSHLLVSHR PPKPLTCVAM SRDGRFIAAG ESGNQPAVLV WDCSTMSFVS ELKGHLYGVE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAAATCA ACAATCGCAA ACTCAAGAAA TCAGAAACAT CGTCATCTTC AAAGGTAAGA 60
ACCATTACTA ATATTATAAA GATTCTCATA ATCCCCAACT TTTTTTATAA ACCCTAATTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR023302--Pept_S9A_N
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0006s09770g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001371	Ailuropoda melanoleuca	32.61	8.00e-102	365.00
IUUC-Atr-003165	Amborella trichopoda	47.42	0.00e+00	760.00
IUUC-Apl-003236	Anas platyrhynchos	32.85	7.00e-104	372.00
IUUC-Aca-004486	Anolis carolinensis	32.20	2.00e-95	343.00
IUUC-Aly-006434	Arabidopsis lyrata	45.37	4.00e-159	555.00
IUUC-Ath-007624	Arabidopsis thaliana	51.27	0.00e+00	849.00
IUUC-Ago-007823	Ashbya gossypii	29.70	3.00e-10	60.50
IUUC-Acl-008257	Aspergillus clavatus	21.80	3.00e-23	103.00
IUUC-Afl-008426	Aspergillus flavus	22.21	6.00e-23	102.00
IUUC-Afu-008757	Aspergillus fumigatus	23.63	7.00e-19	89.40
IUUC-Ani-009489	Aspergillus nidulans	22.43	7.00e-26	112.00
IUUC-Ang-009797	Aspergillus niger	26.96	7.00e-13	69.30
IUUC-Aor-009966	Aspergillus oryzae	22.21	6.00e-23	102.00
IUUC-Ate-010425	Aspergillus terreus	21.38	3.00e-17	84.00
IUUC-Ame-010799	Astyanax mexicanus	32.43	3.00e-114	406.00
IUUC-Bgr-012083	Blumeria graminis	25.07	2.00e-14	74.70
IUUC-Bta-013336	Bos taurus	32.62	3.00e-105	376.00
IUUC-Bci-013828	Botrytis cinerea	22.75	3.00e-26	113.00
IUUC-Bol-016347	Brassica oleracea	49.45	0.00e+00	801.00
IUUC-Bra-017959	Brassica rapa	49.45	0.00e+00	808.00
IUUC-Cel-018592	Caenorhabditis elegans	23.18	1.00e-33	139.00
IUUC-Cja-018986	Callithrix jacchus	32.16	5.00e-103	369.00
IUUC-Cfa-020896	Canis familiaris	32.58	7.00e-102	365.00
IUUC-Cpo-021970	Cavia porcellus	32.36	2.00e-101	363.00
IUUC-Cre-022999	Chlamydomonas reinhardtii	29.35	8.00e-17	82.00
IUUC-Csa-023118	Chlorocebus sabaeus	32.85	2.00e-101	363.00
IUUC-Cho-024310	Choloepus hoffmanni	29.79	6.00e-52	199.00
IUUC-Cin-025412	Ciona intestinalis	38.73	2.00e-29	121.00
IUUC-Csv-026079	Ciona savignyi	28.72	1.00e-35	143.00
IUUC-Cgl-026454	Colletotrichum gloeosporioides	24.43	4.00e-29	123.00
IUUC-Dre-028678	Danio rerio	31.99	1.00e-106	381.00
IUUC-Dno-029772	Dasypus novemcinctus	32.23	1.00e-102	367.00
IUUC-Dor-030615	Dipodomys ordii	32.15	2.00e-101	363.00
IUUC-Dse-031501	Dothistroma septosporum	24.77	8.00e-30	125.00
IUUC-Dme-032179	Drosophila melanogaster	29.33	5.00e-90	327.00
IUUC-Ete-033108	Echinops telfairi	31.38	1.00e-97	350.00
IUUC-Eca-033675	Equus caballus	32.19	1.00e-102	368.00
IUUC-Eeu-035189	Erinaceus europaeus	30.40	5.00e-85	309.00
IUUC-Fca-035826	Felis catus	32.45	1.00e-103	371.00
IUUC-Fal-037354	Ficedula albicollis	32.77	9.00e-104	372.00
IUUC-Fox-037952	Fusarium oxysporum	32.81	2.00e-14	74.30
IUUC-Fso-038440	Fusarium solani	23.53	5.00e-17	82.80
IUUC-Gmo-039644	Gadus morhua	29.83	4.00e-77	283.00
IUUC-Ggr-039729	Gaeumannomyces graminis	23.36	1.00e-13	71.60
IUUC-Gga-040202	Gallus gallus	32.18	4.00e-34	137.00
IUUC-Gac-042491	Gasterosteus aculeatus	30.49	4.00e-81	296.00
IUUC-Gma-043644	Glycine max	54.76	0.00e+00	934.00
IUUC-Ggo-045532	Gorilla gorilla	32.49	9.00e-99	355.00
IUUC-Hsa-046352	Homo sapiens	32.49	8.00e-101	362.00
IUUC-Itr-048210	Ictidomys tridecemlineatus	32.28	2.00e-101	363.00
IUUC-Kpa-049269	Komagataella pastoris	28.69	6.00e-10	59.70
IUUC-Lch-049450	Latimeria chalumnae	30.23	2.00e-90	327.00
IUUC-Loc-052488	Lepisosteus oculatus	34.82	2.00e-109	390.00
IUUC-Lma-053327	Leptosphaeria maculans	24.61	8.00e-32	132.00
IUUC-Laf-053992	Loxodonta africana	32.67	1.00e-104	374.00
IUUC-Mcc-055747	Macaca mulatta	32.19	6.00e-96	345.00
IUUC-Meu-056200	Macropus eugenii	32.11	1.00e-88	321.00
IUUC-Mor-057027	Magnaporthe oryzae	23.24	2.00e-19	91.30
IUUC-Mtr-058383	Medicago truncatula	62.05	7.00e-156	543.00
IUUC-Mga-059325	Meleagris gallopavo	32.72	1.00e-103	371.00
IUUC-Mmr-060693	Microcebus murinus	32.80	2.00e-103	370.00
IUUC-Mdo-063007	Monodelphis domestica	32.67	6.00e-103	369.00
IUUC-Mmu-064067	Mus musculus	33.03	2.00e-104	374.00
IUUC-Mpu-066532	Mustela putorius furo	32.93	4.00e-104	372.00
IUUC-Mlu-068153	Myotis lucifugus	32.58	2.00e-102	367.00
IUUC-Nfi-068613	Neosartorya fischeri	22.49	6.00e-29	122.00
IUUC-Ncr-068758	Neurospora crassa	31.25	2.00e-13	71.20
IUUC-Nle-069578	Nomascus leucogenys	33.20	9.00e-101	362.00
IUUC-Opr-070397	Ochotona princeps	32.67	7.00e-106	378.00
IUUC-Ont-072333	Oreochromis niloticus	32.75	1.00e-101	363.00
IUUC-Oan-073644	Ornithorhynchus anatinus	31.02	2.00e-81	296.00
IUUC-Ocu-074274	Oryctolagus cuniculus	32.71	2.00e-104	374.00
IUUC-Ola-087185	Oryzias latipes	31.06	5.00e-95	342.00
IUUC-Olu-087860	Ostreococcus lucimarinus	25.94	2.00e-13	70.90
IUUC-Oga-088733	Otolemur garnettii	32.28	2.00e-101	364.00
IUUC-Oar-089569	Ovis aries	32.28	6.00e-102	365.00
IUUC-Ptr-090553	Pan troglodytes	31.79	7.00e-99	355.00
IUUC-Pan-092735	Papio anubis	32.98	2.00e-103	370.00
IUUC-Psi-093457	Pelodiscus sinensis	33.16	2.00e-102	367.00
IUUC-Pma-094285	Petromyzon marinus	33.51	2.00e-108	386.00
IUUC-Pno-094837	Phaeosphaeria nodorum	30.40	2.00e-18	88.20
IUUC-Ppa-095596	Physcomitrella patens	40.39	9.00e-173	601.00
IUUC-Pfo-096069	Poecilia formosa	33.47	1.00e-95	343.00
IUUC-Pab-098737	Pongo abelii	32.49	9.00e-101	361.00
IUUC-Pca-100323	Procavia capensis	36.36	1.00e-40	161.00
IUUC-Pva-102895	Pteropus vampyrus	32.36	1.00e-103	371.00
IUUC-Pte-104373	Pyrenophora teres	27.11	5.00e-15	76.60
IUUC-Pyt-104804	Pyrenophora triticirepentis	27.56	4.00e-16	80.10
IUUC-Rno-105598	Rattus norvegicus	32.90	2.00e-104	374.00
IUUC-Sha-107013	Sarcophilus harrisii	32.67	1.00e-103	371.00
IUUC-Ssl-108471	Sclerotinia sclerotiorum	23.04	4.00e-13	70.10
IUUC-Smo-109134	Selaginella moellendorffii	40.61	7.00e-167	581.00
IUUC-Sly-110969	Solanum lycopersicum	51.29	0.00e+00	748.00
IUUC-Stu-112838	Solanum tuberosum	53.43	2.00e-140	492.00
IUUC-Sar-113261	Sorex araneus	32.01	2.00e-100	360.00
IUUC-Ssc-115317	Sus scrofa	32.85	1.00e-105	378.00
IUUC-Tgu-117055	Taeniopygia guttata	32.64	8.00e-103	368.00
IUUC-Tru-118066	Takifugu rubripes	31.53	2.00e-90	327.00
IUUC-Tsy-118799	Tarsius syrichta	31.02	7.00e-56	212.00
IUUC-Tni-120316	Tetraodon nigroviridis	32.59	7.00e-92	331.00
IUUC-Tca-121475	Theobroma cacao	55.16	0.00e+00	946.00
IUUC-Tre-122008	Trichoderma reesei	30.30	8.00e-12	65.90
IUUC-Tme-127128	Tuber melanosporum	24.01	5.00e-25	109.00
IUUC-Tbe-128005	Tupaia belangeri	30.62	2.00e-69	257.00
IUUC-Ttr-128722	Tursiops truncatus	30.63	3.00e-87	317.00
IUUC-Vda-129957	Verticillium dahliae	22.49	8.00e-26	112.00
IUUC-Vpa-130392	Vicugna pacos	43.75	3.00e-16	80.50
IUUC-Vvi-131035	Vitis vinifera	60.71	0.00e+00	989.00
IUUC-Xtr-132966	Xenopus tropicalis	32.58	2.00e-97	350.00
IUUC-Xma-134296	Xiphophorus maculatus	30.45	3.00e-96	346.00
IUUC-Yli-134437	Yarrowia lipolytica	31.01	3.00e-10	60.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence