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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Cel-018317
Ensembl Protein ID T19B10.6.1
UniProt Accession Q22557; SPRTN_CAEEL
Genbank Protein ID CAA98538.1
Protein Name SprT-like domain-containing protein Spartan; DNA damage protein targeting VCP; Protein with SprT-like domain at the N terminus
Genbank Nucleotide ID Z74043
Gene Name dvc-1; T19B10.6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
WBGene00011834 T19B10.6.1 T19B10.6.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNARAID2
Protein-protein Interaction
iRefIndexMentha
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
Status Reviewed
Details
Family Domain References (PMIDs)
UBD/ZnF/UBZ UBZ 23042605
Classification
Family E-value Score Start End
UBD/ZnF/UBZ 3.50e-06 27.5 345 367
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   UBD/ZnF/UBZ
   S: 2    lvCPvCqkmvdqtdfeeHlDeCl 24
           + CP C ++v++++++ HlD+Cl
   Q: 345  VICPSCNTEVMENLIHGHLDYCL 367
           79********************8 PP
   
Organism Caenorhabditis elegans
Functional Description
(View)

Functional Description


     Regulator of UV-induced DNA damage response: required to protect genome stability during DNA replication, possibly via recruitment of vcp/p97 (cdc-48.1 or cdc-48.2) recruitment.
 Regulator of UV-induced DNA damage response: required to protect genome stability during DNA replication, possibly via recruitment of vcp/p97 (cdc-48.1 or cdc-48.2) recruitment.
Protein Sequence
(Fasta)
MSRSSLVDPS FELSDPCPDI HALFIQFDAR FFGGSLACCE VKWSPRMYAC AGICSYEIRG 60
GRGGLCSIRL SKPLLTLRPR SDLVETLLHE MIHAYLFVKE RNRDRDGHGP QFQAHMHRIN 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Cel-018317|UBD,UBZ|Caenorhabditis elegans
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ACCAACAAAA ACATTTGTAT TGAATGTAAG CCGATTCGTT TATTTATTCA TTTCTGTTCT 60
TGTATTTTTT CAAAAGTTAG TTTTGAAGTT TACATATTTC TTTTTTTTTC CAAAATTTGG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Cel-018317|UBD,UBZ|Caenorhabditis elegans
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0158--Chromosome
KW-0181--Complete proteome
KW-0227--DNA damage
KW-0234--DNA repair
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR006640--SprT-like_domain
IPR006642--Znf_Rad18_put
PROSITE

PS00142--ZINC_PROTEASE
Pfam

PF10263--SprT-like
SMART

SM00731--SprT
SM00734--ZnF_Rad18
Gene Ontology

GO:0005694--C:chromosome
GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0046872--F:metal ion binding
GO:0031593--F:polyubiquitin binding
GO:0006974--P:cellular response to DNA damage stimulus
GO:0006281--P:DNA repair
KEGG cel:CELE_T19B10.6
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001028 Aegilops tauschii 38.85 1.00e-19 89.40
IUUC-Aml-001352 Ailuropoda melanoleuca 67.01 1.00e-84 305.00
IUUC-Atr-002445 Amborella trichopoda 43.60 4.00e-42 164.00
IUUC-Apl-003724 Anas platyrhynchos 66.04 3.00e-45 174.00
IUUC-Aca-005382 Anolis carolinensis 61.79 1.00e-82 298.00
IUUC-Ame-011053 Astyanax mexicanus 66.67 2.00e-78 285.00
IUUC-Bgr-012304 Blumeria graminis 29.10 6.00e-03 33.50
IUUC-Bta-012578 Bos taurus 65.10 2.00e-81 295.00
IUUC-Bci-013808 Botrytis cinerea 48.57 2.00e-02 32.00
IUUC-Bol-016573 Brassica oleracea 50.00 1.10e-01 30.40
IUUC-Bra-017895 Brassica rapa 50.00 8.70e-02 30.80
IUUC-Cja-019824 Callithrix jacchus 65.62 3.00e-81 294.00
IUUC-Cfa-020307 Canis familiaris 65.62 3.00e-82 297.00
IUUC-Cpo-022142 Cavia porcellus 62.37 3.00e-79 287.00
IUUC-Cre-022820 Chlamydomonas reinhardtii 37.10 1.00e-28 119.00
IUUC-Csa-024002 Chlorocebus sabaeus 65.10 7.00e-81 293.00
IUUC-Cho-024371 Choloepus hoffmanni 61.76 9.00e-29 119.00
IUUC-Cin-025503 Ciona intestinalis 64.73 1.00e-82 298.00
IUUC-Csv-025903 Ciona savignyi 66.67 5.00e-77 279.00
IUUC-Cgl-026753 Colletotrichum gloeosporioides 36.25 4.00e-04 37.70
IUUC-Dre-027871 Danio rerio 67.65 3.00e-86 311.00
IUUC-Dno-029800 Dasypus novemcinctus 63.68 9.00e-81 292.00
IUUC-Dor-030856 Dipodomys ordii 63.79 6.00e-65 239.00
IUUC-Dme-031958 Drosophila melanogaster 53.48 1.00e-68 253.00
IUUC-Ete-032321 Echinops telfairi 66.16 8.00e-81 293.00
IUUC-Eca-033610 Equus caballus 65.80 5.00e-83 300.00
IUUC-Eeu-034608 Erinaceus europaeus 66.84 4.00e-83 300.00
IUUC-Fca-035456 Felis catus 58.37 7.00e-85 306.00
IUUC-Fal-036725 Ficedula albicollis 59.20 5.00e-62 230.00
IUUC-Fox-037675 Fusarium oxysporum 40.62 1.30e-02 32.00
IUUC-Fso-038353 Fusarium solani 33.96 1.00e-03 36.60
IUUC-Gmo-039428 Gadus morhua 66.67 7.00e-77 279.00
IUUC-Ggr-039914 Gaeumannomyces graminis 32.76 3.00e-04 38.50
IUUC-Gga-041138 Gallus gallus 65.62 7.00e-80 290.00
IUUC-Gac-041946 Gasterosteus aculeatus 65.57 1.00e-74 272.00
IUUC-Ggo-044909 Gorilla gorilla 64.58 4.00e-80 290.00
IUUC-Hsa-046804 Homo sapiens 65.10 7.00e-81 293.00
IUUC-Hvu-047629 Hordeum vulgare 31.63 1.00e-19 89.40
IUUC-Itr-048136 Ictidomys tridecemlineatus 66.67 6.00e-82 296.00
IUUC-Lch-050399 Latimeria chalumnae 64.48 2.00e-74 271.00
IUUC-Lpe-050694 Leersia perrieri 32.76 1.00e-19 90.10
IUUC-Loc-052526 Lepisosteus oculatus 72.40 3.00e-86 311.00
IUUC-Lma-053205 Leptosphaeria maculans 49.20 5.00e-50 190.00
IUUC-Laf-054101 Loxodonta africana 64.68 3.00e-84 304.00
IUUC-Mcc-055889 Macaca mulatta 65.10 7.00e-81 293.00
IUUC-Meu-056236 Macropus eugenii 58.14 2.00e-09 55.10
IUUC-Mor-057257 Magnaporthe oryzae 32.79 1.00e-06 46.20
IUUC-Mpo-057531 Magnaporthe poae 32.76 3.00e-04 38.50
IUUC-Mga-059774 Meleagris gallopavo 60.67 2.00e-65 241.00
IUUC-Mmr-061635 Microcebus murinus 64.25 1.00e-81 295.00
IUUC-Mdo-062699 Monodelphis domestica 64.36 5.00e-80 290.00
IUUC-Mmu-063270 Mus musculus 55.47 8.00e-84 303.00
IUUC-Mac-065121 Musa acuminata 32.70 1.00e-20 92.40
IUUC-Mpu-065833 Mustela putorius furo 63.98 2.00e-83 301.00
IUUC-Mlu-067479 Myotis lucifugus 67.35 8.00e-64 236.00
IUUC-Ncr-068774 Neurospora crassa 27.66 6.00e-05 40.80
IUUC-Nle-069224 Nomascus leucogenys 65.10 4.00e-81 293.00
IUUC-Opr-070699 Ochotona princeps 46.76 1.00e-58 219.00
IUUC-Ont-072423 Oreochromis niloticus 65.37 7.00e-84 303.00
IUUC-Oan-073554 Ornithorhynchus anatinus 62.67 7.00e-30 119.00
IUUC-Ocu-074946 Oryctolagus cuniculus 60.65 5.00e-81 292.00
IUUC-Oba-075090 Oryza barthii 32.69 2.00e-18 86.70
IUUC-Obr-076066 Oryza brachyantha 37.50 7.00e-20 90.90
IUUC-Ogl-077361 Oryza glaberrima 29.53 4.00e-16 77.80
IUUC-Ogu-078561 Oryza glumaepatula 29.95 1.00e-15 76.30
IUUC-Oin-080045 Oryza indica 29.95 1.00e-15 76.30
IUUC-Olo-080733 Oryza longistaminata 40.68 1.00e-15 77.00
IUUC-Ome-081338 Oryza meridionalis 32.69 2.00e-18 86.30
IUUC-Oni-082571 Oryza nivara 29.95 8.00e-16 77.00
IUUC-Opu-083290 Oryza punctata 32.21 3.00e-18 85.50
IUUC-Oru-084470 Oryza rufipogon 29.95 5.00e-16 77.40
IUUC-Osa-086222 Oryza sativa 32.69 2.00e-18 86.30
IUUC-Ola-087333 Oryzias latipes 67.37 8.00e-82 296.00
IUUC-Olu-087722 Ostreococcus lucimarinus 29.03 2.60e-02 33.90
IUUC-Oga-088956 Otolemur garnettii 65.28 7.00e-83 299.00
IUUC-Oar-090014 Ovis aries 65.10 2.00e-81 295.00
IUUC-Ptr-091565 Pan troglodytes 65.10 7.00e-81 293.00
IUUC-Pan-092756 Papio anubis 65.10 8.00e-81 292.00
IUUC-Psi-093051 Pelodiscus sinensis 61.69 6.00e-58 216.00
IUUC-Pma-094409 Petromyzon marinus 60.74 2.00e-43 166.00
IUUC-Pno-094926 Phaeosphaeria nodorum 47.59 9.00e-49 186.00
IUUC-Ppa-095658 Physcomitrella patens 58.33 7.00e-03 33.90
IUUC-Pfo-096555 Poecilia formosa 68.39 1.00e-82 299.00
IUUC-Pab-098754 Pongo abelii 60.53 4.00e-47 180.00
IUUC-Pca-100166 Procavia capensis 65.20 2.00e-85 308.00
IUUC-Pva-102910 Pteropus vampyrus 67.01 2.00e-82 298.00
IUUC-Pte-104222 Pyrenophora teres 34.07 1.00e-48 185.00
IUUC-Pyt-104688 Pyrenophora triticirepentis 47.31 4.00e-48 184.00
IUUC-Rno-105616 Rattus norvegicus 50.00 4.00e-55 207.00
IUUC-Sha-106669 Sarcophilus harrisii 60.77 2.00e-80 291.00
IUUC-Smo-109048 Selaginella moellendorffii 43.81 3.00e-42 163.00
IUUC-Sit-110221 Setaria italica 31.28 2.00e-19 89.40
IUUC-Sar-113141 Sorex araneus 52.08 7.00e-61 226.00
IUUC-Sbi-114252 Sorghum bicolor 31.34 2.00e-19 89.00
IUUC-Ssc-115883 Sus scrofa 66.32 3.00e-82 297.00
IUUC-Tgu-116997 Taeniopygia guttata 59.31 8.00e-75 273.00
IUUC-Tru-117785 Takifugu rubripes 67.39 6.00e-77 280.00
IUUC-Tsy-119449 Tarsius syrichta 60.83 2.00e-47 181.00
IUUC-Tni-120379 Tetraodon nigroviridis 67.89 3.00e-81 294.00
IUUC-Tre-121886 Trichoderma reesei 42.00 6.00e-03 34.30
IUUC-Tvi-122337 Trichoderma virens 51.52 7.00e-03 34.30
IUUC-Tae-125077 Triticum aestivum 33.67 1.00e-21 95.90
IUUC-Tur-126257 Triticum urartu 33.80 4.00e-23 101.00
IUUC-Tbe-128156 Tupaia belangeri 65.62 2.00e-80 291.00
IUUC-Ttr-128748 Tursiops truncatus 66.88 4.00e-67 247.00
IUUC-Vda-129771 Verticillium dahliae 33.66 8.00e-04 37.40
IUUC-Vpa-130454 Vicugna pacos 44.63 9.00e-29 120.00
IUUC-Xtr-132163 Xenopus tropicalis 62.50 1.00e-78 285.00
IUUC-Xma-134184 Xiphophorus maculatus 67.88 7.00e-82 296.00
IUUC-Zma-134864 Zea mays 30.65 6.00e-20 90.50
Created Date 25-Jun-2017

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