iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006062

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348714

Gene Name

ARALYDRAFT_895072

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_202146.1	scaffold_202146.1	scaffold_202146.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.70e-09	38.7	177	219

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  ++ +++lp C+H+fh +C+  w       s + +CPlCr
   Q: 177  CPVCLNEFeeDESLRLLPkCNHAFHISCIDTW------LSSHTNCPLCR 219
           ********7655599999**************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MAKKKHRKLF PTLASETNKT LDCSNGVCDP ICPYNCYPEP DYYAISPQLP PWSSSPAPSP 60
SPSPSISAVY QPTQNSSSSL DAISIITITG AVLAILLTGF FLVAKFVSDS VNRDNHGRYQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTTTTGATT GTTTTCTTTA ATGGCGAAGA AGAAGCATCG CAAGCTCTTC CCTACCTTAG 60
CATCAGAGAC AAACAAAACG TTAGACTGCT CGAACGGAGT CTGCGACCCG ATTTGCCCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_895072

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007035	Arabidopsis thaliana	84.04	8.00e-172	595.00
IUUC-Acl-008067	Aspergillus clavatus	45.45	6.00e-13	68.90
IUUC-Bol-015703	Brassica oleracea	61.03	2.00e-120	424.00
IUUC-Bra-016736	Brassica rapa	61.27	2.00e-121	428.00
IUUC-Gma-044241	Glycine max	41.06	1.00e-51	196.00
IUUC-Mtr-058178	Medicago truncatula	39.81	4.00e-50	191.00
IUUC-Pop-099872	Populus trichocarpa	47.16	1.00e-51	196.00
IUUC-Ppe-101257	Prunus persica	74.73	5.00e-40	157.00
IUUC-Sly-111911	Solanum lycopersicum	41.63	2.00e-42	165.00
IUUC-Stu-112902	Solanum tuberosum	36.78	1.00e-45	176.00
IUUC-Tca-120964	Theobroma cacao	38.77	1.00e-47	182.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence