iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112635

Ensembl Protein ID

PGSC0003DMT400079196

UniProt Accession

M1D1D9; M1D1D9_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400030821	PGSC0003DMT400079196	PGSC0003DMT400079196

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.70e-08	34.4	155	197

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  ++ +++lp C+H+fh  C+  w       + +++CPlCr
   Q: 155  CSVCLNEFqdDESLRLLPnCKHAFHIYCIDTW------LRSHINCPLCR 197
           ********7645599999**************......**********8 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MAMMNTRKLF QIITNQSADC IYVCDSTCPY ACYPYVDSDY YIPPPPPPSP SWLQPQLSSK 60
HHQNISPYVI MSVALFASLF ILVSYYLIIV KNCFNWNRRS TPPTQDEEFF DENRAPVIDH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTAATTATA CTTCTCCACC TTATTGACAA GAATCTCAAT GACTAATCAC CTAAATCATC 60
TTAACTTCAT TATAGTTTTT CCAAGATCAA GAAACCTCAT CAAGACACAA TTTTTATCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007035	Arabidopsis thaliana	39.25	2.00e-43	168.00
IUUC-Bol-015703	Brassica oleracea	46.05	1.00e-45	176.00
IUUC-Bra-016736	Brassica rapa	36.29	3.00e-46	177.00
IUUC-Gma-044241	Glycine max	49.01	2.00e-51	194.00
IUUC-Mtr-058178	Medicago truncatula	46.03	4.00e-47	180.00
IUUC-Pop-099872	Populus trichocarpa	57.21	4.00e-58	217.00
IUUC-Sly-111911	Solanum lycopersicum	84.84	1.00e-127	447.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence