iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-120964

Ensembl Protein ID

EOY15913

UniProt Accession

A0A061FG67; A0A061FG67_THECC

Genbank Protein ID

EOY15913.1

Protein Name

RING/U-box superfamily protein, putative

Genbank Nucleotide ID

CM001886

Gene Name

TCM_034836

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_034836	EOY15913	EOY15913

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.00e-08	35.5	149	191

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  ++ +++lp C+H+fh +C+  w         + +CPlCr
   Q: 149  CSVCLNEFqeEETVRLLPkCNHAFHISCIDTW------LGAHTNCPLCR 191
           ********66444*******************......**********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MKNRKLFPTF TETNQTVDCH GFCDPACPYN CYPYPGYYYL PPPPPPSLSD QNHYISPYVI 60
ILVSVLASFF LLIGYYVIIV KSCFGLCWSR NNRQPQAQTD GSDEEFLDEN RVDHPIWFIT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAATTGGTAA AAACAACCAA ACACATACAC ATCAGTCTAC TCCTTACTAA ACCCTGAAAG 60
AGACAAGTTT CTTAATTTTC TTCATTTCTT CTCTTCCAAT TCAAACCAAA GTTTTAAGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006062	Arabidopsis lyrata	37.75	9.00e-48	183.00
IUUC-Ath-007035	Arabidopsis thaliana	41.42	2.00e-45	176.00
IUUC-Bol-015703	Brassica oleracea	45.21	1.00e-47	182.00
IUUC-Bra-016736	Brassica rapa	42.86	8.00e-49	186.00
IUUC-Gma-044241	Glycine max	45.18	5.00e-64	237.00
IUUC-Mtr-058178	Medicago truncatula	38.77	9.00e-56	209.00
IUUC-Pop-099872	Populus trichocarpa	57.22	1.00e-102	365.00
IUUC-Ppe-101257	Prunus persica	45.32	2.00e-61	228.00
IUUC-Sly-111649	Solanum lycopersicum	37.95	3.00e-53	201.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence