iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006290

Ensembl Protein ID

fgenesh2_kg.25__1__AT5G42200.1

UniProt Accession

D7MU48; D7MU48_ARALL

Genbank Protein ID

EFH39358.1; EFH41819.1

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348736; GL348720

Gene Name

ARALYDRAFT_494813; ARALYDRAFT_497165

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.25__1__AT5G42200.1	fgenesh2_kg.25__1__AT5G42200.1	fgenesh2_kg.25__1__AT5G42200.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-07	32.6	104	146

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cled++ g   +++p C+H fh+ C   w       s++  CP+Cr
   Q: 104  CAVCLEDIESGqsGRLVPgCNHGFHRLCADTW------LSNHTVCPVCR 146
           ********44444445556*************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MHYTRISPVL VPSPPPTTAV ESSGGGPMIA TVFMALLLPC VGMCIVFLIY LFLLWCSTRR 60
RIERLRFAEP VKPVTGKGLS VLELEKIPKL TGKELAIIAR STECAVCLED IESGQSGRLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGAACAAG AGACGGTGTA AGATGCACTA CACACGCATC TCACCGGTTT TAGTACCATC 60
TCCGCCACCA ACAACCGCCG TTGAATCTAG CGGCGGTGGG CCGATGATAG CTACCGTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_494813; aly:ARALYDRAFT_497165

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006964	Arabidopsis thaliana	93.25	6.00e-83	298.00
IUUC-Bol-015170	Brassica oleracea	81.62	3.00e-63	232.00
IUUC-Bra-017135	Brassica rapa	80.00	5.00e-61	226.00
IUUC-Gma-042987	Glycine max	59.56	3.00e-42	162.00
IUUC-Mtr-058369	Medicago truncatula	55.15	4.00e-38	149.00
IUUC-Pop-099353	Populus trichocarpa	61.60	4.00e-39	153.00
IUUC-Ppe-101352	Prunus persica	56.34	5.00e-38	149.00
IUUC-Pgr-103421	Puccinia graminis	42.31	1.00e-11	61.60
IUUC-Sly-111161	Solanum lycopersicum	49.19	9.00e-30	121.00
IUUC-Stu-112507	Solanum tuberosum	47.48	5.00e-34	135.00
IUUC-Tca-120975	Theobroma cacao	55.47	2.00e-39	154.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence