iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016367

Ensembl Protein ID

Bo2g155590.1

UniProt Accession

A0A0D3AXC3; A0A0D3AXC3_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo2g155590	Bo2g155590.1	Bo2g155590.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.20e-26	91.1	453	485
UBD/Beta-Prp	4.40e-42	145.8	410	630

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDl 30
           H + v++laf  ++  l +v+++dD+ ikvWDl
   Q: 453  HMGAVNDLAFaiPNrQLcVVTCGDDKLIKVWDL 485
           9999********875444799***********7 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfs.pdgk.ilvtgseDrtikvwdlstgkcvhtlkghedsvlsls 101
           +s +t v++spd++++ +++  + + ++ ++ ++     +++  h ++v+++ f  p+++   vt+++D++ikvwdl+ +k + t++ghe  v+s+ 
   Q: 410  IS-VTRVAWSPDGNFIGVAYSKHLVHLYAFSGPNDlrqHAEIDAHMGAVNDLAFAiPNRQlCVVTCGDDKLIKVWDLQGRKHF-TFEGHETPVYSIC 504
           44.455999**********************9998555566789999*****996244447999**************99987.8**********88 PP
   S: 102  fsp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl....ktgkllrtltgghtdsvyslsfdsng 192
            +   + +++ s+  d  i+ w  ++     + +++  ++ +++ ++ dg+ l+s+++ +   ++ +    + g++ rt  g h++    ++fd ++
   Q: 505  PHHkeNIQFIFSTAIDGKIKAWLYDNMGSRVDYDAP-GKWCTTMLYSADGSRLFSCGTSKDGDFFLVewneSEGSIKRTYLGFHKKLAGVVQFDTSK 600
           8776666***************99887777756655.559999999999999999987554444444444399*********9************** PP
   S: 193  kelvsgsldgtvklwdlqtgecvrtlnght 222
           ++++++++dg++k+wd+ + +++ +  +  
   Q: 601  NHFLAVGEDGQIKFWDMDNINVLTSTDAEG 630
           *****************9888877666555 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLEEEK FKESVHRLEK ESGFFFNTKY FDEKVLAGEW DEVEKYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDRQDK AKAVEILVQD LRVFSTFNED LYKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCATCGT TAAGCCGAGA GCTGGTGTTT CTCATACTGC AATTTCTCGA GGAAGAGAAA 60
TTCAAGGAGT CTGTCCACAG GTTAGTCTAG AGGAAGTTCA ATCGAAAATT CCAAGAATTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR011044--Quino_amine_DH_bsu
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007641	Arabidopsis thaliana	87.17	0.00e+00	1995.00
IUUC-Bra-017100	Brassica rapa	93.64	0.00e+00	2129.00
IUUC-Gma-042940	Glycine max	75.11	0.00e+00	1735.00
IUUC-Mtr-058168	Medicago truncatula	74.65	0.00e+00	1749.00
IUUC-Pop-099188	Populus trichocarpa	76.10	0.00e+00	1743.00
IUUC-Ppe-102061	Prunus persica	76.37	0.00e+00	1761.00
IUUC-Tca-121768	Theobroma cacao	76.37	0.00e+00	1766.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence