iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016530

Ensembl Protein ID

Bo3g005030.1

UniProt Accession

A0A0D3B0B8; A0A0D3B0B8_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo3g005030	Bo3g005030.1	Bo3g005030.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.30e-16	59.6	508	540
UBD/Beta-Prp	2.80e-40	139.9	459	736

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sd.tllvsGsdDgtikvWDl 30
           Ht+sv+ laf   ++   +v++++D  ikvWD 
   Q: 508  HTGSVNHLAFsypNEqLSVVTCGNDRLIKVWDA 540
           ************5445559*************5 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkgheds 96
           +++++ + ++ v++spd+sl+ +++  + + +++++ g+      +++ h++ v+ + fs   +    vt+++Dr+ikvwd  tg    t++ghe+ 
   Q: 459  FSDDERASVNHVAWSPDGSLIGVAYSKNIVHIYSFDGGNDirnHLEIEAHTGSVNHLAFSYPNEqlSVVTCGNDRLIKVWDAFTGAKRLTFEGHEAP 555
           67888899999***************************9944444679***********955544799***************************** PP
   S: 97   vlslsfsp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl....ktgkllrtltgghtdsvysls 187
           vls+  ++  + ++++s+  d  i+ w  +    + + +++ ++++++ ++++d   l+s+++++    + +      g++ rt +g  +++v  ++
   Q: 556  VLSVCPDQkkNIQVILSTATDGEIKGWFYDDVGASVTYDAPGHSSTRM-AFSSDRARLFSCGTNKEGESFLVewkdGKGSIKRTYQGLGQRAVGIVQ 651
           ***999997677**************9877777776456555555555.5555567777777776544444444449******************** PP
   S: 188  fdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvk..svrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvav 272
           fd ++++++++++ +t+k+wd+ +++ + t ++    +   +vrf +++++l++ +s   +ri  l ++d lk l+  +++  + +v
   Q: 652  FDTTKNRFLAAGDESTIKIWDMNNTNLLTTIHADGGLPAspCVRFNKEGTLLAVSTSNHGVRI--LATDDGLKFLKTVENRTLATKV 736
           ********************************9997664338**********99999******..7888888888877766666555 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MGEVAAQIPT RFGHELRACL RCRRVKIYDQ IRDSGCENCH FFKLDEVPER IVDVTTLNFN 60
GSSPTTAAEE ENKTNSLYYS LSLLLAFPDS SIGETFSHLI SAVMATLEKD LMFLILQFLD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGAGAAG TGGCTGCTCA GATTCCGACG AGGTTCGGCC ACGAGCTCAG GGCTTGTCTT 60
CGATGCCGCC GTGTCAAAAT CTACGATCAG GTATCGTGGA TTCTCTCTCT CTCTCTTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR006595--CTLH_C
IPR006594--LisH
IPR022800--Spt4/RpoE2_Znf
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF06093--Spt4

SMART

SM00668--CTLH
SM01389--Spt4
SM00320--WD40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence