iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-003035

Ensembl Protein ID

ERN07934

UniProt Accession

W1PJL7; W1PJL7_AMBTC

Genbank Protein ID

ERN07934.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI393609

Gene Name

AMTR_s00012p00242760

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00012p00242760	ERN07934	ERN07934

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-23	80.9	282	312
E3 adaptor/Cullin RING/APC_C/CDC20	4.20e-140	466.8	148	449

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH+++v++l++ +d + l+sG++D+++ vW+
   Q: 282  GHKSEVCGLKWsHDdRELASGGNDNQLLVWN 312
           8***********55599*************9 PP

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 1    pekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladleekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtltghsarvga 101
           p+kvldap+l+ddfylnL+dWss+nvlav+Lg++vylwsa+t++v+kl+dl ++d+v++v+w++eg++la+Gt +g v+i+D +++kkvr++ gh+ar g 
   Q: 148  PNKVLDAPSLQDDFYLNLVDWSSQNVLAVGLGTCVYLWSASTSKVTKLCDLGPSDSVCAVQWTREGSYLAIGTISGDVQIWDSARCKKVRNMGGHQARSGV 248
           689************************************************************************************************** PP
   S: 102  LsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdasssePlkkfkehkaavkaiawsPwqkslLasGGGta 202
           L+W +++lssGsrd++il++d+rv+   +s++ +h++evCGlkw++d+++LasGGnDn++ vw+++s++P+ k ++h+aavkai+wsP+q++lLasGGGta
   Q: 249  LAWSSCILSSGSRDRSILQHDLRVSTDFVSKFVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNQQSTKPVLKLTQHTAAVKAITWSPHQHGLLASGGGTA 349
           ***************************************************************************************************** PP
   S: 203  DrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslalspdgeaivtaagDetlrfwklfdkkka 302
           Drci+fwnt++g+ll+++dtgsqvc+l+w k+ +elvs+hG+++n+i++wkyp++ kva+l+gh++Rvl+la+spdg++ivt+agDetlrfw++f + k+
   Q: 350  DRCIRFWNTSSGTLLNSVDTGSQVCNLAWCKNVNELVSAHGYSQNQIMVWKYPTMGKVATLTGHSMRVLYLAISPDGQTIVTGAGDETLRFWNIFPSAKT 449
           ***********************************************************************************************88766 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MDSGNNGRKT TLNLPSGMSL HTLSTISSPS KPTIYSDRFI PCRSSSRLHC FSVNEKASPS 60
KEGGNEAYCN LLRSELLGSD CSPSTPEKFS GRSSRVLLGS PASPSKNLFR FKADPIRGST 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTCCG GCAACAATGG CAGGAAAACT ACCTTGAATC TCCCTTCTGG CATGTCCCTT 60
CACACCCTCT CCACAATTTC TTCCCCTTCG AAACCCACAA TTTACAGCGA TCGATTCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG

atr:18436173

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006009	Arabidopsis lyrata	69.73	0.00e+00	628.00
IUUC-Ath-007167	Arabidopsis thaliana	69.87	1.00e-179	621.00
IUUC-Bdi-015033	Brachypodium distachyon	72.05	0.00e+00	645.00
IUUC-Bol-016159	Brassica oleracea	69.04	5.00e-180	622.00
IUUC-Bra-017745	Brassica rapa	68.68	6.00e-179	619.00
IUUC-Cin-025327	Ciona intestinalis	53.83	2.00e-126	444.00
IUUC-Gma-043563	Glycine max	66.80	7.00e-178	615.00
IUUC-Hvu-047486	Hordeum vulgare	82.71	8.00e-153	531.00
IUUC-Lpe-051568	Leersia perrieri	68.30	5.00e-160	556.00
IUUC-Meu-056276	Macropus eugenii	52.00	6.00e-117	412.00
IUUC-Mor-057113	Magnaporthe oryzae	48.85	8.00e-123	432.00
IUUC-Mtr-057760	Medicago truncatula	68.72	0.00e+00	635.00
IUUC-Mla-059048	Melampsora laricipopulina	47.01	1.00e-103	369.00
IUUC-Mac-064942	Musa acuminata	75.51	0.00e+00	686.00
IUUC-Oba-075417	Oryza barthii	75.88	2.00e-158	551.00
IUUC-Obr-076033	Oryza brachyantha	73.11	0.00e+00	625.00
IUUC-Ogl-077441	Oryza glaberrima	72.00	1.00e-178	618.00
IUUC-Ogu-078877	Oryza glumaepatula	69.98	1.00e-170	591.00
IUUC-Oin-079461	Oryza indica	70.22	1.00e-170	591.00
IUUC-Olo-080716	Oryza longistaminata	70.44	5.00e-164	570.00
IUUC-Ome-081663	Oryza meridionalis	71.59	1.00e-170	592.00
IUUC-Oni-083097	Oryza nivara	69.78	3.00e-170	590.00
IUUC-Opu-083464	Oryza punctata	69.78	2.00e-168	584.00
IUUC-Oru-084848	Oryza rufipogon	69.78	3.00e-170	590.00
IUUC-Osa-085451	Oryza sativa	72.00	1.00e-178	618.00
IUUC-Pop-099953	Populus trichocarpa	74.94	0.00e+00	634.00
IUUC-Ppe-101285	Prunus persica	72.65	0.00e+00	646.00
IUUC-Pgr-103466	Puccinia graminis	47.90	6.00e-107	380.00
IUUC-Ptt-103888	Puccinia triticina	50.00	2.00e-95	342.00
IUUC-Pyt-104445	Pyrenophora triticirepentis	42.60	2.00e-105	375.00
IUUC-Sja-107900	Schizosaccharomyces japonicus	49.06	1.00e-115	409.00
IUUC-Spo-108056	Schizosaccharomyces pombe	47.16	1.00e-108	385.00
IUUC-Sit-110550	Setaria italica	71.96	0.00e+00	651.00
IUUC-Sly-111395	Solanum lycopersicum	74.94	0.00e+00	632.00
IUUC-Stu-112356	Solanum tuberosum	68.43	0.00e+00	635.00
IUUC-Sbi-114386	Sorghum bicolor	73.58	0.00e+00	646.00
IUUC-Sre-115222	Sporisorium reilianum	46.23	7.00e-119	419.00
IUUC-Tsy-118931	Tarsius syrichta	38.41	3.00e-58	218.00
IUUC-Tca-121682	Theobroma cacao	75.74	0.00e+00	646.00
IUUC-Tae-123028	Triticum aestivum	73.48	0.00e+00	665.00
IUUC-Tur-126545	Triticum urartu	75.08	1.00e-139	488.00
IUUC-Uma-129555	Ustilago maydis	46.03	8.00e-120	423.00
IUUC-Vvi-131748	Vitis vinifera	74.28	0.00e+00	677.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence