iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057760

Ensembl Protein ID

KEH34720

UniProt Accession

A0A072V956; A0A072V956_MEDTR

Genbank Protein ID

KEH34720.1

Protein Name

Cell cycle switch protein CCS52a

Genbank Nucleotide ID

CM001219

Gene Name

MTR_3g067940

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_3g067940	KEH34720	KEH34720

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/APC_C/CDC20	4.00e-140	467.8	160	459
E3 adaptor/Cullin RING/DCX/DWD	1.10e-26	93.2	294	327

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 1    pekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladleekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtltghsarvga 101
           p kvldap+l+ddfylnL+dWss+n+lav+Lg++vylwsa++++v+kl+dl + d v+sv+w++eg+++++Gt+ g+v+i+D +++kkvrt+ gh++r g 
   Q: 160  PRKVLDAPSLQDDFYLNLVDWSSQNTLAVGLGTCVYLWSASNSKVTKLCDLGPYDGVCSVQWTKEGSFISIGTNGGQVQIWDGTKCKKVRTMGGHQTRTGV 260
           679************************************************************************************************** PP
   S: 102  LsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdasssePlkkfkehkaavkaiawsPwqkslLasGGGta 202
           L+Wn+ +l+sGsrd++il++d+rv+   + +l +h++evCGlkw+ d+++LasGGnDn++ vw+++s++P+ + +eh+aavkaiawsP+q++lL+sGGGta
   Q: 261  LAWNSRILASGSRDRNILQHDMRVPSDFIGKLVGHKSEVCGLKWSCDDRELASGGNDNQLLVWNQHSQQPTLRLTEHTAAVKAIAWSPHQSNLLVSGGGTA 361
           ***************************************************************************************************** PP
   S: 203  DrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslalspdgeaivtaagDetlrfwklfdkk 300
           Drci+fwnt++g++l+++dtgsqvc+l+wsk+ +elvsthG+++n+i++wkypsl+kva+l+gh++Rvl+la+spdg++ivt+agDetlrfw++f + 
   Q: 362  DRCIRFWNTTNGHQLNSVDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSLAKVATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSM 459
           ***********************************************************************************************765 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrt 32
           gH+++v++l++  +d+ l+sG++D+++ vW+ ++
   Q: 294  GHKSEVCGLKWscDDRELASGGNDNQLLVWNQHS 327
           8***********65599*************9666 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MESPQAKKSG LNLPAGMSTI TSLRLETLST PPSSASPRAI SNLSSTPSPS KSSKCSDRFI 60
PCRSSSRLHT FGLIDNQSPV KEGSNEAYNR LLKSELFGPD FASPSSSPAG CGVGSPLVSP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGTCAC CACAAGCAAA AAAATCAGGT CTAAACCTCC CGGCTGGGAT GTCAACAATA 60
ACCTCCCTCC GTCTAGAAAC GCTATCAACA CCCCCTTCTT CCGCTTCGCC TCGCGCGATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033010--Cdc20/Fizzy
IPR013979--TIF_beta_prop-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08662--eIF2A

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG

mtr:MTR_3g067940

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003035	Amborella trichopoda	68.72	0.00e+00	645.00
IUUC-Aly-006009	Arabidopsis lyrata	76.78	0.00e+00	703.00
IUUC-Ath-007167	Arabidopsis thaliana	76.78	0.00e+00	687.00
IUUC-Bdi-015033	Brachypodium distachyon	71.56	1.00e-178	619.00
IUUC-Bol-016159	Brassica oleracea	76.57	0.00e+00	689.00
IUUC-Bra-017745	Brassica rapa	76.21	0.00e+00	686.00
IUUC-Cre-022944	Chlamydomonas reinhardtii	47.22	2.00e-105	375.00
IUUC-Cne-026933	Cryptococcus neoformans	63.29	5.00e-119	421.00
IUUC-Ete-032562	Echinops telfairi	71.92	1.00e-83	303.00
IUUC-Gma-043563	Glycine max	80.78	0.00e+00	747.00
IUUC-Hvu-047486	Hordeum vulgare	79.59	1.00e-146	511.00
IUUC-Lpe-051568	Leersia perrieri	63.08	2.00e-159	555.00
IUUC-Mac-064942	Musa acuminata	71.46	0.00e+00	668.00
IUUC-Oba-075417	Oryza barthii	80.70	5.00e-155	540.00
IUUC-Obr-076033	Oryza brachyantha	71.66	6.00e-179	619.00
IUUC-Ogl-077441	Oryza glaberrima	66.19	2.00e-175	608.00
IUUC-Ogu-078877	Oryza glumaepatula	63.88	4.00e-170	590.00
IUUC-Oin-079461	Oryza indica	68.65	3.00e-165	573.00
IUUC-Olo-080716	Oryza longistaminata	68.97	3.00e-159	555.00
IUUC-Ome-081663	Oryza meridionalis	65.42	1.00e-167	582.00
IUUC-Oni-083097	Oryza nivara	63.95	3.00e-166	577.00
IUUC-Opu-083464	Oryza punctata	63.21	2.00e-166	578.00
IUUC-Oru-084848	Oryza rufipogon	63.95	3.00e-166	577.00
IUUC-Osa-085451	Oryza sativa	66.19	2.00e-175	608.00
IUUC-Pop-099953	Populus trichocarpa	78.07	0.00e+00	720.00
IUUC-Ppe-101285	Prunus persica	81.69	0.00e+00	734.00
IUUC-Ptt-103888	Puccinia triticina	54.23	2.00e-93	335.00
IUUC-Sja-107900	Schizosaccharomyces japonicus	49.16	2.00e-112	398.00
IUUC-Sit-110550	Setaria italica	65.90	9.00e-177	612.00
IUUC-Sly-111395	Solanum lycopersicum	73.95	0.00e+00	699.00
IUUC-Stu-112356	Solanum tuberosum	74.60	0.00e+00	719.00
IUUC-Sbi-114386	Sorghum bicolor	67.01	3.00e-176	610.00
IUUC-Sre-115222	Sporisorium reilianum	64.08	5.00e-116	410.00
IUUC-Tsy-118931	Tarsius syrichta	37.00	1.00e-57	216.00
IUUC-Tca-121682	Theobroma cacao	77.76	0.00e+00	741.00
IUUC-Tae-123028	Triticum aestivum	70.64	5.00e-177	613.00
IUUC-Tur-126545	Triticum urartu	70.61	1.00e-135	475.00
IUUC-Uma-129555	Ustilago maydis	54.00	7.00e-116	410.00
IUUC-Vvi-131748	Vitis vinifera	80.04	0.00e+00	753.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence