iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.6__1761__AT5G17600.1	fgenesh2_kg.6__1761__AT5G17600.1	fgenesh2_kg.6__1761__AT5G17600.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.30e-08	35.1	140	182

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f   + +++lp C+H+fh+ C+  w       + + +CPlCr
   Q: 140  CSVCLSEFeeNESLRLLPkCNHAFHLPCIDTW------LKSHSNCPLCR 182
           ********5533499999**************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MPNPNPWSPY DSSYNDCSQG ICNIYCPQWC YLIFPPPPPS FFLDDDSSSS SSSFSPLLIA 60
LIGILTSAFI LVSYYTLISK YCHRHHQTSS SETLNHNSDG FFSSTQRIST TGDGLNDSMI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCCAAAGAT AAGGAGAGAA AGAGAGAGTG ACACTTCACC ACACCATCTC CTCTCTCTCT 60
TCTTCTTCTT CTTTCTCTGC TTCTGCAACA CAAAAACACC ATTGAGAATC AAATCAAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_488627

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002971	Amborella trichopoda	39.54	3.00e-50	191.00
IUUC-Ath-006705	Arabidopsis thaliana	90.03	4.00e-160	556.00
IUUC-Bol-015947	Brassica oleracea	61.20	9.00e-87	312.00
IUUC-Bra-017128	Brassica rapa	60.82	1.00e-101	362.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence