iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-120979

Ensembl Protein ID

EOY10314

UniProt Accession

A0A061F730; A0A061F730_THECC

Genbank Protein ID

EOY10314.1

Protein Name

RING/U-box superfamily protein, putative

Genbank Nucleotide ID

CM001883

Gene Name

TCM_025688

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_025688	EOY10314	EOY10314

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.50e-08	35.2	140	182

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  ++ ++vlp C+H+fh  C+  w       + + +CPlCr
   Q: 140  CSVCLSEFqeDESLRVLPkCNHAFHVPCIDTW------LKSHSSCPLCR 182
           ********7655599999**************......**********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSSSASTPNP WTPYDTYKDC SQGLCSIYCP QWCYLIFPPP PPFSINDDDD NSGTDFSPLI 60
IAVIGILASV FILVSYYTII SKYCRRRRQD HTRLQLNESR DELNHDGWQA ASEGLDEGLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTCCATTC TTTTTTATTT TCTTTTTTCT TCTTTTAAAT ACATACTTAA CATAAAACAA 60
ACTTGTTGCA GAGACTGAAT ATGAGTTCTT CAGCTAGCAC CCCAAATCCT TGGACACCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006095	Arabidopsis lyrata	45.41	2.00e-59	221.00
IUUC-Ath-006705	Arabidopsis thaliana	44.36	1.00e-71	262.00
IUUC-Bdi-014160	Brachypodium distachyon	43.02	7.00e-64	236.00
IUUC-Bol-015947	Brassica oleracea	44.35	2.00e-63	234.00
IUUC-Bra-017128	Brassica rapa	46.38	3.00e-74	270.00
IUUC-Ont-071771	Oreochromis niloticus	37.50	2.00e-15	76.30
IUUC-Pop-099300	Populus trichocarpa	56.88	2.00e-105	374.00
IUUC-Ppe-101180	Prunus persica	51.85	2.00e-90	325.00
IUUC-Sly-111604	Solanum lycopersicum	43.92	1.00e-63	236.00
IUUC-Stu-112707	Solanum tuberosum	46.28	5.00e-64	236.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence