iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114000

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G130700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g011120	Sb03g011120.1	Sb03g011120.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.60e-07	31.4	228	269

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cled+   ++  + +pC H fha+C+  w         + +CP+Cr
   Q: 228  CPVCLEDYaagER-AREMPCRHRFHANCIVPW------LEMHSSCPVCR 269
           ********88666.999***************......9999******8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAEQASAGRY WCHMCAAVVS PAEGEAEMKC PLCHSGFLEE METARGAAVA AVATDDGDGD 60
GTVAQVYSGG ADRPSSIWAH AILSTVDSSV RRRRNRRQQE AAGDVYDWND PEFSLRRRRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTAATCACTG CCCTAAACAT GTGTGCCGGG CCGAGGTCAT AATCGATGCA CGGAGGAGGA 60
TGCCGCCGCA GCTGAGGCGA TTGATAATAT AAAAGCAGGC GGAGACCGCC GGCCCCCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_03g011120

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005802	Arabidopsis lyrata	37.80	4.00e-49	187.00
IUUC-Ath-006601	Arabidopsis thaliana	37.72	4.00e-49	187.00
IUUC-Bol-016413	Brassica oleracea	38.11	7.00e-48	184.00
IUUC-Bra-016619	Brassica rapa	38.49	1.00e-45	176.00
IUUC-Cja-020001	Callithrix jacchus	31.72	3.00e-25	107.00
IUUC-Hvu-047180	Hordeum vulgare	51.37	2.00e-70	258.00
IUUC-Kpa-049389	Komagataella pastoris	30.00	4.00e-10	57.80
IUUC-Nfi-068450	Neosartorya fischeri	37.80	7.00e-13	68.20
IUUC-Ogl-077130	Oryza glaberrima	48.28	8.00e-56	209.00
IUUC-Ogu-078161	Oryza glumaepatula	50.53	9.00e-57	213.00
IUUC-Oin-079387	Oryza indica	50.69	2.00e-65	241.00
IUUC-Ome-081592	Oryza meridionalis	62.59	2.00e-44	171.00
IUUC-Oni-082071	Oryza nivara	48.97	1.00e-59	222.00
IUUC-Opu-083986	Oryza punctata	48.94	2.00e-57	215.00
IUUC-Oru-084179	Oryza rufipogon	48.97	1.00e-59	222.00
IUUC-Osa-085763	Oryza sativa	48.97	1.00e-59	222.00
IUUC-Sit-110067	Setaria italica	68.89	1.00e-106	379.00
IUUC-Tru-118087	Takifugu rubripes	46.15	6.00e-23	100.00
IUUC-Tae-122764	Triticum aestivum	52.78	3.00e-66	244.00
IUUC-Tur-126792	Triticum urartu	58.13	3.00e-55	207.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence