iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006018

Ensembl Protein ID

scaffold_400681.1

UniProt Accession

D7LL41; D7LL41_ARALL

Genbank Protein ID

EFH55111.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348716

Gene Name

ARALYDRAFT_901180

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_400681.1	scaffold_400681.1	scaffold_400681.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-06	27.9	541	573

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH  ++tclaf  + + lvs+  Dg++ +W+++
   Q: 541  GHDQKITCLAFsRCfNVLVSSDSDGKLCLWSTK 573
           8**********977899*************976 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MILDEKNRKN LVFLILQFFD EEGYEESLHL LEQDSRVFFD FSYFSNAILN GNFKEADDYL 60
LAFTRPEANT YSRKMFFDLF KRKLSEAPDR SGGSEAVSIF SKDLRRIPVL KDDSFDDLVE 120

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Nucleotide Sequence
(Fasta)

ATTTCCTCTG GAGCTAAACG ATGATCTTAG ACGAGAAAAA TCGGAAAAAT CTCGTATTCC 60
TAATCTTACA GTTCTTTGAT GAAGAAGGCT ACGAAGAAAG CTTACACTTG TACGGTTTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR006595--CTLH_C
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

KEGG

aly:ARALYDRAFT_901180

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006606	Arabidopsis thaliana	88.62	0.00e+00	1355.00
IUUC-Bol-016333	Brassica oleracea	73.98	0.00e+00	1114.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence