iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017482

Ensembl Protein ID

Bra000634.1-P

UniProt Accession

M4C8V6; M4C8V6_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra000634	Bra000634.1	Bra000634.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-15	57.6	188	216

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf.sd.tllvsGsdDgtikvWDlrtg 33
            ++ + +d  ++ sGs Dg i++WD+ t+
   Q: 188  LSVTWsPDaQRIFSGSSDGLIRCWDVNTC 216
           6899*********************9876 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MLEYRCSSVD WKPSPVVALA NSADDTQVAA AREDGSLEIW LVSPGAVGWH CQLTIHGDPN 60
SRISSLAWCR AGSQGLPSGR LFSSSIDGSI SEWDLFDLKQ KVVLDSIGIS IWQMAVSPTY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTAGAGT ACCGTTGCAG CTCCGTTGAT TGGAAGCCAT CTCCGGTGGT AGCCCTAGCA 60
AACAGCGCCG ACGACACTCA AGTCGCGGCG GCTCGCGAGG ACGGTTCTCT AGAAATCTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0009793--P:embryo development ending in seed dormancy
GO:0010311--P:lateral root formation
GO:0048366--P:leaf development
GO:0010305--P:leaf vascular tissue pattern formation
GO:0010073--P:meristem maintenance
GO:2000012--P:regulation of auxin polar transport
GO:0010449--P:root meristem growth

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001161	Aegilops tauschii	48.27	0.00e+00	696.00
IUUC-Aml-001310	Ailuropoda melanoleuca	24.22	3.00e-50	193.00
IUUC-Atr-003076	Amborella trichopoda	52.80	0.00e+00	765.00
IUUC-Apl-003367	Anas platyrhynchos	32.53	5.00e-15	73.60
IUUC-Aca-004429	Anolis carolinensis	27.49	6.00e-27	114.00
IUUC-Aly-006271	Arabidopsis lyrata	87.08	0.00e+00	1342.00
IUUC-Ath-007331	Arabidopsis thaliana	86.15	0.00e+00	1322.00
IUUC-Ago-007843	Ashbya gossypii	23.20	1.00e-28	121.00
IUUC-Afl-008438	Aspergillus flavus	28.06	9.00e-28	119.00
IUUC-Ani-009321	Aspergillus nidulans	28.30	3.00e-30	127.00
IUUC-Ang-009592	Aspergillus niger	24.93	1.00e-26	115.00
IUUC-Aor-010220	Aspergillus oryzae	28.06	1.00e-27	118.00
IUUC-Ate-010317	Aspergillus terreus	26.05	3.00e-28	120.00
IUUC-Ame-010957	Astyanax mexicanus	24.75	3.00e-47	183.00
IUUC-Bgr-012057	Blumeria graminis	29.10	1.00e-30	128.00
IUUC-Bta-012473	Bos taurus	23.92	2.00e-47	184.00
IUUC-Bdi-014203	Brachypodium distachyon	51.67	0.00e+00	783.00
IUUC-Bol-016163	Brassica oleracea	97.13	0.00e+00	1511.00
IUUC-Cja-019942	Callithrix jacchus	23.65	5.00e-49	189.00
IUUC-Cfa-020549	Canis familiaris	26.15	4.00e-40	159.00
IUUC-Cpo-022088	Cavia porcellus	24.01	3.00e-47	183.00
IUUC-Csa-023773	Chlorocebus sabaeus	24.37	3.00e-51	196.00
IUUC-Cho-024302	Choloepus hoffmanni	23.45	1.00e-36	147.00
IUUC-Cin-025384	Ciona intestinalis	26.28	1.00e-48	187.00
IUUC-Dre-027460	Danio rerio	23.67	3.00e-48	186.00
IUUC-Dno-029594	Dasypus novemcinctus	24.14	3.00e-47	183.00
IUUC-Dor-030564	Dipodomys ordii	27.23	4.00e-14	72.80
IUUC-Dse-031179	Dothistroma septosporum	21.85	1.00e-26	115.00
IUUC-Dme-031603	Drosophila melanogaster	23.71	1.00e-20	94.70
IUUC-Ete-032655	Echinops telfairi	24.41	2.00e-32	133.00
IUUC-Eca-033838	Equus caballus	24.17	3.00e-49	189.00
IUUC-Eeu-034548	Erinaceus europaeus	23.14	7.00e-42	165.00
IUUC-Fca-035715	Felis catus	24.01	2.00e-50	193.00
IUUC-Fal-037394	Ficedula albicollis	23.86	2.00e-36	147.00
IUUC-Gmo-039235	Gadus morhua	22.36	1.00e-43	171.00
IUUC-Ggr-040043	Gaeumannomyces graminis	27.37	2.00e-26	114.00
IUUC-Gga-041172	Gallus gallus	25.06	3.00e-49	190.00
IUUC-Gac-042466	Gasterosteus aculeatus	24.97	9.00e-47	181.00
IUUC-Gma-044129	Glycine max	56.21	0.00e+00	882.00
IUUC-Ggo-045416	Gorilla gorilla	23.54	3.00e-42	166.00
IUUC-Hsa-046115	Homo sapiens	24.21	1.00e-48	187.00
IUUC-Hvu-047229	Hordeum vulgare	53.19	0.00e+00	655.00
IUUC-Itr-048015	Ictidomys tridecemlineatus	24.45	2.00e-49	190.00
IUUC-Kpa-049370	Komagataella pastoris	25.22	1.00e-17	84.70
IUUC-Lch-050153	Latimeria chalumnae	26.62	3.00e-47	183.00
IUUC-Lpe-051220	Leersia perrieri	51.69	0.00e+00	768.00
IUUC-Loc-052617	Lepisosteus oculatus	24.48	5.00e-46	179.00
IUUC-Laf-053613	Loxodonta africana	23.45	5.00e-47	182.00
IUUC-Mcc-055707	Macaca mulatta	24.36	3.00e-49	189.00
IUUC-Meu-056800	Macropus eugenii	22.53	6.00e-15	75.90
IUUC-Mtr-058393	Medicago truncatula	52.00	0.00e+00	765.00
IUUC-Mga-060018	Meleagris gallopavo	26.33	5.00e-42	165.00
IUUC-Mmr-061115	Microcebus murinus	25.90	3.00e-47	182.00
IUUC-Mdo-062235	Monodelphis domestica	23.95	4.00e-49	189.00
IUUC-Mmu-063158	Mus musculus	24.70	6.00e-49	188.00
IUUC-Mac-065380	Musa acuminata	56.57	0.00e+00	897.00
IUUC-Mpu-065805	Mustela putorius furo	24.34	1.00e-50	194.00
IUUC-Mlu-066951	Myotis lucifugus	23.86	2.00e-49	190.00
IUUC-Nle-069657	Nomascus leucogenys	24.01	3.00e-50	193.00
IUUC-Opr-070250	Ochotona princeps	23.37	6.00e-45	175.00
IUUC-Ocu-074741	Oryctolagus cuniculus	24.01	4.00e-46	179.00
IUUC-Oba-074974	Oryza barthii	51.29	0.00e+00	785.00
IUUC-Obr-076586	Oryza brachyantha	54.27	0.00e+00	676.00
IUUC-Ogl-077782	Oryza glaberrima	52.35	0.00e+00	794.00
IUUC-Ogu-078333	Oryza glumaepatula	49.49	0.00e+00	769.00
IUUC-Oin-079852	Oryza indica	52.47	0.00e+00	797.00
IUUC-Olo-080370	Oryza longistaminata	53.98	0.00e+00	635.00
IUUC-Ome-081442	Oryza meridionalis	51.55	0.00e+00	781.00
IUUC-Oni-082341	Oryza nivara	49.21	0.00e+00	766.00
IUUC-Opu-083824	Oryza punctata	51.02	0.00e+00	772.00
IUUC-Oru-084827	Oryza rufipogon	51.06	0.00e+00	782.00
IUUC-Osa-085742	Oryza sativa	52.29	0.00e+00	793.00
IUUC-Ola-086466	Oryzias latipes	25.79	4.00e-43	169.00
IUUC-Olu-087761	Ostreococcus lucimarinus	26.66	2.00e-62	233.00
IUUC-Oga-088721	Otolemur garnettii	26.00	2.00e-43	170.00
IUUC-Oar-089532	Ovis aries	23.65	3.00e-48	186.00
IUUC-Ptr-091604	Pan troglodytes	24.13	2.00e-50	193.00
IUUC-Pan-092060	Papio anubis	29.46	4.00e-33	135.00
IUUC-Psi-093070	Pelodiscus sinensis	25.15	3.00e-43	169.00
IUUC-Pma-094201	Petromyzon marinus	25.09	5.00e-37	148.00
IUUC-Pfo-097207	Poecilia formosa	25.71	2.00e-45	177.00
IUUC-Pab-097746	Pongo abelii	23.89	5.00e-50	192.00
IUUC-Pop-099991	Populus trichocarpa	64.50	0.00e+00	1050.00
IUUC-Pca-100562	Procavia capensis	25.39	1.00e-30	127.00
IUUC-Ppe-101747	Prunus persica	65.75	0.00e+00	1034.00
IUUC-Pva-103054	Pteropus vampyrus	24.13	2.00e-50	194.00
IUUC-Pte-104064	Pyrenophora teres	26.61	8.00e-25	108.00
IUUC-Pyt-104595	Pyrenophora triticirepentis	26.89	3.00e-25	110.00
IUUC-Rno-105155	Rattus norvegicus	24.10	4.00e-48	186.00
IUUC-Sce-106369	Saccharomyces cerevisiae	24.02	4.00e-30	126.00
IUUC-Sha-107149	Sarcophilus harrisii	23.96	3.00e-48	186.00
IUUC-Sja-107777	Schizosaccharomyces japonicus	25.12	1.00e-51	197.00
IUUC-Spo-108372	Schizosaccharomyces pombe	23.73	5.00e-45	175.00
IUUC-Smo-108851	Selaginella moellendorffii	40.41	9.00e-164	570.00
IUUC-Sit-110454	Setaria italica	53.25	0.00e+00	798.00
IUUC-Sly-111020	Solanum lycopersicum	60.17	0.00e+00	928.00
IUUC-Stu-112330	Solanum tuberosum	60.65	0.00e+00	930.00
IUUC-Sar-113254	Sorex araneus	27.83	9.00e-17	81.60
IUUC-Sbi-114624	Sorghum bicolor	53.21	0.00e+00	671.00
IUUC-Tgu-117407	Taeniopygia guttata	24.70	1.00e-20	94.00
IUUC-Tru-118733	Takifugu rubripes	23.56	4.00e-40	159.00
IUUC-Tsy-119213	Tarsius syrichta	31.15	8.00e-29	121.00
IUUC-Tni-120894	Tetraodon nigroviridis	30.86	4.00e-33	135.00
IUUC-Tca-121606	Theobroma cacao	60.48	0.00e+00	973.00
IUUC-Tae-125441	Triticum aestivum	50.24	0.00e+00	778.00
IUUC-Ttr-128720	Tursiops truncatus	24.01	4.00e-49	189.00
IUUC-Vpa-130412	Vicugna pacos	28.01	3.00e-27	116.00
IUUC-Vvi-131256	Vitis vinifera	62.63	0.00e+00	965.00
IUUC-Xtr-131828	Xenopus tropicalis	23.06	2.00e-37	150.00
IUUC-Xma-133394	Xiphophorus maculatus	26.09	3.00e-46	179.00
IUUC-Yli-134565	Yarrowia lipolytica	25.36	4.00e-29	122.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence