iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017271

Ensembl Protein ID

Bra000742.1-P

UniProt Accession

M4C964; M4C964_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra000742	Bra000742.1	Bra000742.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-06	29.5	84	128

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cl+df  +d  + lp C Hvfh +Cl +w     + +++ +CP+Cr
   Q: 84   CTVCLSDFesDDNIRQLPnCRHVFHDHCLDRW----IVDCRKMTCPICR 128
           9*******9966699999**************....9***********8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MGLPTDFKEL QIPGYVLKTL YVIGFFRDLV DALCPYISLP RFLDHEIPRP DPIRPETFTT 60
VSLADKISPV VRFSDIQTDL EDCCTVCLSD FESDDNIRQL PNCRHVFHDH CLDRWIVDCR 120

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Nucleotide Sequence
(Fasta)

ATGGGTCTTC CGACAGATTT TAAGGAGCTT CAGATTCCAG GATACGTACT TAAGACGCTT 60
TACGTCATCG GTTTCTTTAG AGACCTGGTC GATGCTCTTT GTCCTTACAT CAGTTTACCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR008152--Clathrin_a/b/g-adaptin_app_Ig
IPR013037--Clathrin_b-adaptin_app_Ig-like
IPR013041--Coatomer/clathrin_app_Ig-like
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF02883--Alpha_adaptinC2
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0030131--C:clathrin adaptor complex
GO:0008270--F:zinc ion binding
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006278	Arabidopsis lyrata	70.32	3.00e-58	216.00
IUUC-Ath-007497	Arabidopsis thaliana	69.68	9.00e-59	218.00
IUUC-Bol-016182	Brassica oleracea	97.06	1.00e-76	277.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence