iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099904

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Transcription factor family protein

Genbank Nucleotide ID

CM000341

Gene Name

POPTRDRAFT_837174; POPTR_0005s02460g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s02460	POPTR_0005s02460.1	POPTR_0005s02460.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-06	30.0	34	79

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf....kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle      ++ +  l+CgH+fh+dC+    g+  + +++ +CP Cr
   Q: 34   CSICLEVVtdngDRSWAKLQCGHQFHLDCI----GSAFNVKGAMQCPNCR 79
           ******997666666889***********9....55579**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGLGNSGNDV IVDDGGGGGG GGLNGKSFGG SVSCSICLEV VTDNGDRSWA KLQCGHQFHL 60
DCIGSAFNVK GAMQCPNCRK IEKGQWLYAN GCRSLPEFTM DDWAHDEDLY DLSYSEMSFG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACAACAACA AAAGAGAAGA ACAAGAAACA GAAACAGAAA CTCTCTAAAA AAGCAATCTT 60
TTTCTCGTAA CCTCTGGTAA TTCACTTAGG ATCGAGTCCT AATCTATCGG GTATTTTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0005s02460g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000830	Aegilops tauschii	41.42	8.00e-49	187.00
IUUC-Atr-002748	Amborella trichopoda	47.10	3.00e-59	222.00
IUUC-Aly-005896	Arabidopsis lyrata	59.23	6.00e-71	260.00
IUUC-Ath-007403	Arabidopsis thaliana	57.89	6.00e-66	244.00
IUUC-Bdi-014427	Brachypodium distachyon	36.65	2.00e-60	225.00
IUUC-Bol-015640	Brassica oleracea	57.76	4.00e-68	251.00
IUUC-Bra-016676	Brassica rapa	52.52	1.00e-63	236.00
IUUC-Eeu-035106	Erinaceus europaeus	28.81	8.00e-03	35.00
IUUC-Gmo-039590	Gadus morhua	32.81	1.00e-04	41.60
IUUC-Gma-043885	Glycine max	74.39	2.00e-142	498.00
IUUC-Hvu-047201	Hordeum vulgare	46.47	2.00e-61	229.00
IUUC-Lpe-051497	Leersia perrieri	37.47	3.00e-53	202.00
IUUC-Mtr-058220	Medicago truncatula	72.59	3.00e-144	504.00
IUUC-Mga-059849	Meleagris gallopavo	34.38	6.00e-04	38.10
IUUC-Mac-065621	Musa acuminata	47.22	4.00e-55	208.00
IUUC-Oba-074989	Oryza barthii	36.07	2.00e-51	196.00
IUUC-Obr-076234	Oryza brachyantha	38.20	3.00e-60	225.00
IUUC-Ogl-077797	Oryza glaberrima	38.44	1.00e-59	223.00
IUUC-Ogu-078642	Oryza glumaepatula	36.84	1.00e-54	206.00
IUUC-Oin-079296	Oryza indica	38.44	1.00e-59	223.00
IUUC-Olo-080222	Oryza longistaminata	34.55	2.00e-44	172.00
IUUC-Ome-081719	Oryza meridionalis	36.99	3.00e-56	212.00
IUUC-Oni-082543	Oryza nivara	36.58	1.00e-53	204.00
IUUC-Opu-083127	Oryza punctata	42.18	3.00e-50	192.00
IUUC-Oru-085073	Oryza rufipogon	37.92	3.00e-61	228.00
IUUC-Osa-086081	Oryza sativa	38.93	2.00e-64	239.00
IUUC-Ola-086359	Oryzias latipes	35.94	7.00e-05	42.00
IUUC-Pno-094897	Phaeosphaeria nodorum	35.94	7.00e-08	50.80
IUUC-Ppe-101525	Prunus persica	79.60	6.00e-148	516.00
IUUC-Smo-108730	Selaginella moellendorffii	53.77	5.00e-31	128.00
IUUC-Sit-110374	Setaria italica	38.01	1.00e-59	223.00
IUUC-Sly-110853	Solanum lycopersicum	71.22	2.00e-142	498.00
IUUC-Stu-112616	Solanum tuberosum	70.44	3.00e-132	464.00
IUUC-Sbi-114202	Sorghum bicolor	39.04	7.00e-58	217.00
IUUC-Tca-121669	Theobroma cacao	80.10	1.00e-155	542.00
IUUC-Tae-125197	Triticum aestivum	46.47	1.00e-56	213.00
IUUC-Tur-126263	Triticum urartu	35.39	5.00e-25	108.00
IUUC-Vvi-131398	Vitis vinifera	80.49	2.00e-157	547.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence