iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109666

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377585

Gene Name

SELMODRAFT_413195

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_413195	EFJ25896	EFJ25896

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.90e-11	43.9	1170	1199
E3 activity/RING/U-box	4.80e-25	88.1	454	525

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H+  vt+la+ s+ ++l s+s D t++vW 
   Q: 1170 HSKAVTSLALsSSsNRLYSASLDRTVRVWA 1199
           9999******9556***************7 PP

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawceen 72
           +p++f+CpI+++l+ dPv+l++G+ty+r++I++wl++g++tcP+trq l+++ l   n++l+rl+++w e +
   Q: 454  PPKDFVCPITNQLFDDPVTLETGQTYERTAIREWLERGNTTCPITRQLLKNRALpSTNYVLKRLVENWKEIH 525
           699*****************************************************************8766 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MTMLPLFDAS IENVLLSSVS RYALDALIDP SQRRRQREAE RRWILDRQQQ QQGQDREVRY 60
ADQAVLANLG WGIDALEEAI QTGNVETKIA RLDYAEKMLQ VCALLDRGSD TAGISNAYLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACAATGC TTCCATTGTT TGACGCGAGC ATAGAGAATG TCCTCCTCTC TTCCGTGTCG 60
CGCTATGCCC TGGATGCCCT AATCGATCCA TCCCAGCGGC GGCGGCAGCG CGAGGCGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04564--U-box
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

smo:SELMODRAFT_413195

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000289	Aegilops tauschii	34.89	5.00e-143	501.00
IUUC-Aly-006263	Arabidopsis lyrata	26.38	6.00e-40	159.00
IUUC-Ath-006648	Arabidopsis thaliana	26.36	5.00e-69	255.00
IUUC-Bol-016092	Brassica oleracea	26.16	2.00e-66	247.00
IUUC-Bra-016701	Brassica rapa	26.16	4.00e-72	266.00
IUUC-Gma-042764	Glycine max	37.26	0.00e+00	679.00
IUUC-Mtr-057843	Medicago truncatula	36.98	0.00e+00	633.00
IUUC-Mac-064685	Musa acuminata	36.35	3.00e-171	595.00
IUUC-Ppe-101141	Prunus persica	38.41	0.00e+00	657.00
IUUC-Spo-108130	Schizosaccharomyces pombe	27.20	3.00e-03	35.40
IUUC-Tca-121527	Theobroma cacao	40.08	0.00e+00	664.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence