iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017609

Ensembl Protein ID

Bra001613.1-P

UniProt Accession

M4CBN3; M4CBN3_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra001613	Bra001613.1	Bra001613.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.80e-17	62.4	461	501

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd..tllvsGsdDgtikvWDlrtgvllks 38
           H++ v++laf  ++    +v+++ D+tikvWD  tg++l++
   Q: 461  HAGNVNDLAFslPNqqLCFVTCGEDKTIKVWDAVTGNKLHT 501
           99**********6654448*****************99875 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKDTVHRLEK ESGFYFNMRY FEDSVTAGEW DDVEKYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDKKDN AKAVDILVKE LKVFSTFNEE LFKEITMLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGTCGC TCAGCAGAGA ACTCGTCTTT TTGATTCTCC AGTTTCTCGA CGAAGAGAAA 60
TTCAAAGACA CTGTTCACAG GTCAAACTTC AAATTTCAAA GAGAAAAAAA AAGATTACTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR006595--CTLH_C
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence