iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007156

UUCD1 version

UUC-ArT-01021

Ensembl Protein ID

AT3G18773.1

UniProt Accession

Q9LS99; ATL77_ARATH

Genbank Protein ID

BAB01804.1; AEE76145.1; BAD95334.1; ABF19045.1; AAM64481.1

Protein Name

RING-H2 finger protein ATL77; RING-type E3 ubiquitin transferase ATL77

Genbank Nucleotide ID

AB026654; CP002686; AK222192; BT025292; AY086917

Gene Name

ATL77; At3g18773; MVE11.14

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G18773	AT3G18773.1	AT3G18773.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.40e-08	34.8	130	172

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl+df   ++++vlp C+H fh+ C+ kw        ++ +CP Cr
   Q: 130  CVICLSDFvaGEQLRVLPkCNHGFHLRCIDKW------LTQHMTCPKCR 172
           ********88555*******************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MFSEHLPSSS SQVFQEHFID SFVSRKLLQQ IPFAHNAQQA HVPDKNNLSG NVLMLLSILL 60
CGIICSLGLH YIIRCAFIRS RSFMISDPIS IPSTPRDSSV NKGIKKKALK MLPVVNYSPE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTATGAATG AAGCGACACG ACACATGTGA GAAAAGCTCA ATAATACATG AGAATTATAG 60
AGCAACAAAA CACAACACTG CTTTACAACT ATCAAATACT AGTGTCGCCA AACCATCATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT3G18773

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006178	Arabidopsis lyrata	93.55	2.00e-110	390.00
IUUC-Bol-015320	Brassica oleracea	76.34	7.00e-84	302.00
IUUC-Bra-017411	Brassica rapa	75.34	5.00e-68	249.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence