iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112836

Ensembl Protein ID

PGSC0003DMT400026153

UniProt Accession

M1AMR1; M1AMR1_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400010081	PGSC0003DMT400026153	PGSC0003DMT400026153

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.00e-35	119.2	216	253
UBD/Beta-Prp	1.20e-59	203.2	216	433

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H d ++cl+   d +ll s+s+D+tikvW+ ++ ++l 
   Q: 216  HFDAISCLSMsEDqKLLYSASWDKTIKVWRASDSKCLE 253
           8899******8567****************99988875 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw..dls...tgkcvhtlk. 91
           h + i+c+ +s+d++ll ++s+d+tikvw++++ k+l+s++ h+++v+++    +g +l +gs D+t+k+w  + +   t    h ++ 
   Q: 216  HFDAISCLSMSEDQKLLYSASWDKTIKVWRASDSKCLESIKAHDDAVNSIVVGFNG-LLFSGSADGTVKIWrkESQgkgT---KHFFSq 300
           667899*************************************************9.**************753333331...332224 PP
   S: 92   ...ghedsvlslsfspsgdklvsGshdrtirvwdletgqclee..tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..ktgkllr 173
              ++e  v++l+++ps+++l  Gs+d  ++ w  + ++ l++  +l+gh+ ++ c++  +  nl++sGs+D+ + +W+       +l 
   Q: 301  tllKQECAVTALAVDPSSNYLYCGSSDGLVNFW--QGDKLLSHggVLRGHKLATLCLAAAG--NLIFSGSADNNICVWKRdgGEHICLS 385
           44599****************************..5555555578***********99999..***************985566779** PP
   S: 174  tltgghtdsvyslsfdsng........kelvsgsldgtvklwdlqtgec 214
            l+g h ++v++l++++++        + + sgsld++vk+w ++++ +
   Q: 386  VLSG-HSGPVKCLAVEEEQeqkggdkqFIVYSGSLDKSVKIWRISSQLV 433
           **99.*********999999999**989999*************98754 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MATEENSHPK QAFGNVLQSD RNEDEYSFRI SHTSETSHLP PRLSSDYSSP LATSPTRDSS 60
ASPYLDPSWD QSHQTSPLSR SPWTSHVENN STNYSYTGLM GSLVREEGHI YSLAASGDLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCCTTTTCA GTTTTCCCGT CCAAAAATCT TGTACCTAAG TTCTTCATGG CCTCATTTTC 60
TCTTTCCTAT TGATATGTAT GTTCATTCCT CTTAAACATC CTACGTACCC TTTTCACATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015603	Brassica oleracea	61.41	4.00e-126	443.00
IUUC-Gma-043604	Glycine max	66.58	1.00e-149	521.00
IUUC-Hvu-047445	Hordeum vulgare	56.53	4.00e-125	440.00
IUUC-Mtr-057896	Medicago truncatula	63.48	7.00e-155	538.00
IUUC-Ome-081447	Oryza meridionalis	52.31	2.00e-101	361.00
IUUC-Ppa-095309	Physcomitrella patens	44.02	4.00e-76	277.00
IUUC-Pop-099710	Populus trichocarpa	63.77	2.00e-149	520.00
IUUC-Ppe-101450	Prunus persica	62.61	1.00e-160	558.00
IUUC-Sly-111339	Solanum lycopersicum	94.57	0.00e+00	894.00
IUUC-Tca-121487	Theobroma cacao	60.64	6.00e-162	563.00
IUUC-Tae-123171	Triticum aestivum	50.60	3.00e-116	410.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence